Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 4 Aligned Residues 308 % Identity 33% Template c3e9hB_ PDB info PDB header:ligase Chain: B: PDB Molecule:lysyl-trna synthetase; PDBTitle: lysyl-trna synthetase from bacillus stearothermophilus2 complexed with l-lysylsulfamoyl adenosine Resolution 2.10 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V	A
Query Conservation
Alig confidence																																							.																.	.	.	.
Template Conservation																																							.																.	.	.	.
Template Sequence		M	N	P	E	S	K	K	T	F	I	T	R	S	L	I	I	Q	S	M	R	R	Y	L	D	S	H	G	Y	L	E	V	E	T	P	M	M	H	.	A	V	A	G	G	A	A	A	R	P	F	I	T	H	H	.	.	.	.	N	A	L	D	M	T	L	Y	M	R	I	A	I	E	L	H	L	K	R	L	I	V	G
Template Known Secondary structure																											T	T								S			.	S	S			S	S	S									.	.	.	.	T	T	T	T							S		S										T
Template Predicted Secondary structure																																							.																.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																		.	.	.	.	.	.	.	150
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	E	S	L	S	Y	Q
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	E	K	V	Y	E	I	G	R	V	F	R	N	E	G	I	S	T	R	H	N	P	E	F	T	M	L	E	L	Y	E	A	Y	A	D	F	R	D	I	M	K	L	T	E	N	L	I	A	H	I	A	T	E	V	L	G	T	T	K	I	Q	Y	G	E	H	L	V	D	L	T	P	E	W	R	R	L	H	M	V
Template Known Secondary structure		T																	B	T	T	B		S											T																							S		S					T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		151	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		Q	A	F	L	R	Y	L	E	I	D	P	.	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	Q	I	S	T	E	D
Query Conservation													.
Alig confidence													.																			.	.																										.	.
Template Conservation																																.	.																										.	.
Template Sequence		D	A	I	K	E	Y	V	G	V	D	F	W	R	Q	M	S	D	E	E	A	R	E	L	A	K	E	H	G	V	E	.	.	V	A	P	H	M	T	F	G	H	I	V	N	E	F	F	E	Q	K	V	E	D	K	L	I	Q	.	.	P	T	F	I	Y	G	H	P	V	E	I	S	P	L	A	K	K	N	P	D	D
Template Known Secondary structure													S	S															T			.	.			T	T															T	G	G	G			S	.	.								B	G	G	G		T	T	B		B		S	S
Template Predicted Secondary structure																																.	.																										.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	V	A	E	R	F	E	V	Y	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	F	T	D	R	F	E	L	F	I	V	G	R	E	H	A	N	A	F	T	E	L	N	D	P	I	D	Q	R	Q	R	F	E	E	Q	L	K	E	R	E	Q	G	N	D	E	A	H	E	M	D	E	D	F	L	E	A	L	E	Y	G	M	P	P	T	G	G	L	G	I	G	V	D	R	L	V	M	L	L	T
Template Known Secondary structure		T	T	B	B	S							T	T									B																				T	T		T	T														T				S															T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	T	L	A	E	V	I	A	F	S	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	P	S	I	R	D	V	L	L	F	P	Q	M	R
Template Known Secondary structure		T		S	S	G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions