Job Description P0A8N7 Confidence 98.49% Date Thu Jan 5 11:08:21 GMT 2012 Rank 80 Aligned Residues 120 % Identity 18% Template c3cmqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase, mitochondrial; PDBTitle: crystal structure of human mitochondrial phenylalanine trna2 synthetase Resolution 2.20 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.													.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V	A
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	I	K	E	R	V	K	E	H	F	Y	K	Q	Y	V	G	R	F	G	T	P	L	F	S	V	Y	D	N	L	S	P	V	V	T	T	W	Q	N	F	D	S	L	L	I	P	A	D	H	P	S	R	K	K	G	D	N	Y	Y	L	N	R	T	H	M	L	R	A	H	T	S	A	H	Q	W	D	L	L	H	A
Template Known Secondary structure																				S	S	S											S								T	G	G	G	T			T	T		G	G	G		G	G	G	S		B	S	S	S	S					S	S	G	G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																						.	.	.	.	.	.	.	130
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	Y	R	L	M	N	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	D	A	F	L	V	V	G	D	V	Y	R	R	D	Q	I	D	S	Q	H	Y	P	I	F	H	Q	L	E	A	V	R	L	F	S	K	H	E	L	F	A	G	I	K	D	G	E	S	L	Q	L	F	E	Q	S	S	R	S	A	H	K	Q	E	T	H	T	M	E	A	V	K	L	V	E	F	D	L	K	Q	T
Template Known Secondary structure		T		S															B	T	T	B		S																	T	T	T	S	T	T	G	G	G			S	B							S	S			T	T	B
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		131	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	D	L	L	Q	Q	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	R	L	M	A	H	L	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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