Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 9 Aligned Residues 300 % Identity 19% Template c2xgtB_ PDB info PDB header:ligase Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic; PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V
Query Conservation
Alig confidence																																																.								.	.	.	.	.	.																			.
Template Conservation																																																.								.	.	.	.	.	.																			.
Template Sequence		I	R	G	E	N	A	A	A	L	L	R	L	R	A	A	A	T	R	A	M	R	E	H	F	Y	N	A	G	Y	V	E	V	A	P	P	T	L	V	Q	T	Q	V	E	G	G	S	.	T	L	F	N	L	D	Y	.	.	.	.	.	.	F	G	E	Q	S	F	L	T	Q	S	S	Q	L	Y	L	E	T	C	.	I
Template Known Secondary structure		T	T	S																								T	T								S			S			S	S		G	G	.	G							.	.	.	.	.	.	T	T							S		S								.
Template Predicted Secondary structure																																																.								.	.	.	.	.	.																			.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160
Predicted Secondary structure																					.																																																				.	.	.	.	.
Query SS confidence																					.																																																				.	.	.	.	.
Query Sequence		A	G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	.	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	S	L	S	Y	Q	Q	A	F	L	R	Y	.	.	.	.	.	L	E	I	D
Query Conservation																					.																																																				.	.	.	.	.
Alig confidence																					.																																																				.	.	.	.	.
Template Conservation
Template Sequence		P	T	L	G	D	V	F	C	I	A	Q	S	Y	R	A	E	K	S	R	T	R	R	H	L	A	E	Y	A	H	V	E	A	E	C	P	F	I	T	L	D	D	L	M	E	K	I	E	E	L	V	C	D	T	V	D	R	L	L	A	D	E	E	A	K	K	L	L	E	H	I	N	P	K	F	Q	P	P	E	R	P
Template Known Secondary structure					S	S													S		B	T	T	B		S											S																							T	S												T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		P	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	.	Q	I	S	T	E	D	H	R	V	A	E	R	F	E	V	Y
Query Conservation																																																																	.
Alig confidence																																														.	.																		.
Template Conservation																																														.	.
Template Sequence		F	L	R	M	E	Y	K	D	A	I	K	W	L	Q	E	H	N	V	E	N	E	F	G	N	T	F	T	Y	G	E	D	I	A	E	A	A	E	R	F	M	T	D	T	I	.	.	N	K	P	I	L	L	N	R	F	P	S	E	I	K	A	F	Y	M	Q	R	D	A	Q	D	N	T	L	T	E	S	V	D	L	L
Template Known Secondary structure																	T	T		B		T	T	S	S	B			T	T	S															.	.	T	S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
		240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		Y	K	G	I	.	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E	V	I
Query Conservation						.
Alig confidence						.																													.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		M	P	G	V	G	E	I	V	G	G	S	M	R	I	W	K	F	D	E	L	S	K	A	F	K	N	V	E	I	D	P	K	P	.	.	.	.	.	.	.	.	Y	Y	W	Y	L	D	Q	R	L	Y	G	T	C	P	H	G	G	Y	G	L	G	L	E	R	F	I	C	W	L	T	N	T	N	H	I	R	D	V	C
Template Known Secondary structure			T	T	T									B														T	T			S	G	G	.	.	.	.	.	.	.	.	G									T	T																				T		S	S	G	G	G	G	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.									.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		319	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	S	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	P	R	F	V
Template Known Secondary structure		S	S			B	T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions