Job Description P0A8N7 Confidence 99.94% Date Thu Jan 5 11:08:21 GMT 2012 Rank 37 Aligned Residues 301 % Identity 18% Template c2j3mA_ PDB info PDB header:ligase Chain: A: PDB Molecule:prolyl-trna synthetase; PDBTitle: prolyl-trna synthetase from enterococcus faecalis complexed2 with atp, manganese and prolinol Resolution 2.3 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	.	.	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L
Query Conservation																																																	.	.
Alig confidence									.	.	.	.																																					.	.
Template Conservation									.	.	.	.
Template Sequence		Y	L	P	L	A	N	R	.	.	.	.	V	L	E	K	L	K	T	I	M	R	E	E	F	E	K	I	D	A	V	E	M	L	M	P	A	L	L	P	A	E	L	W	K	E	S	G	R	Y	E	T	Y	G	P	N	L	Y	R	L	K	D	R	N	D	R	D	Y	I	L	G	P	T	H	E	E	T	F	T	E	L
Template Known Secondary structure									.	.	.	.															T	T	T								S											S					S		T	T	S						T	T								S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		85	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.													.						.	.																								.	.	.																.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.													.						.	.																								.	.	.																.	.	.	.	.	.
Query Sequence		L	V	A	G	C	G	.	.	.	.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	.	E	M	G	R	Y	.	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	.	.	.	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	.	.	.	.	.	.
Query Conservation								.	.	.	.	.	.	.													.						.	.																								.	.	.																.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.													.						.	.																								.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	D	E	I	N	S	Y	K	R	L	P	L	N	L	Y	Q	I	Q	T	K	Y	R	D	E	K	R	S	R	S	G	L	L	R	G	R	E	F	I	M	K	D	G	Y	S	F	H	A	D	E	A	S	L	D	Q	S	Y	R	D	Y	E	K	A	Y	S	R	I	F	E	R	C	G	L	E	F	R	A	I	I	G
Template Known Secondary structure								B	G	G	G																S				S	G	G	G	G		S												S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
																																																											146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	S	Y	Q	Q	A	F	L	R	Y	L	E	I	D	P	L	S	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		D	G	G	K	D	S	K	E	F	M	A	I	S	E	I	G	E	D	T	I	C	Y	S	T	E	S	D	Y	A	A	N	L	E	M	A	T	S	L	Y	T	P	K	K	S	H	E	T	Q	L	D	L	E	K	I	A	T	P	E	V	G	T	I	A	E	V	A	N	F	F	E	V	E	P	Q	R	I	I	K	S	V
Template Known Secondary structure															T	T		S							S	S	S	S					T	T	T																							T	T			S									T			T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
																		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	Q	I	S	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	I	A	D	E	E	P	V	M	V	L	V	R	G	D	H	D	V	N	D	V	K	L	K	N	F	L	G	A	D	F	L	D	E	A	T	E	E	D	A	R	R	V	L	G	A	G	F	G	S	I	G	P	V	N	V	S	E	D	V	K	I	Y	A	D	L	A	V	Q	D	L	A	N	A	I	V	G	A	N
Template Known Secondary structure						T	T									T	T			B										T		S															S	S		G	G	G			S	S	S			T	T	S						G	G	G	G	G			S						S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		E	D	H	R	V	A	E	R	F	E	V	Y	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	L	I	E	A	L	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.														.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		E	D	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	T	N	V	N	P	D	R	D	F	Q	P	.	I	S	Y	E	D	L	R	F	V	Q	E	G	D	P	S	P	D	G	N	G	V	L	A	F	T	K	G	I	E	I	G	H	I	F	K	L	G	T	R	Y	S	D	A	M	G	A	T	V	L
Template Known Secondary structure		S	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.							B	T	T	T	B			.	S						B				T	T		B		T	T	S	S	S	B																	T							T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		362	.	.	.														.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
					288	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure		.	.	.										.
Query SS confidence		.	.	.										.
Query Sequence		.	.	.	K	V	G	M	P	D	C	S	G	.	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E	V	I	A	F	S	V	D	R	A
Query Conservation		.	.	.										.
Alig confidence		.	.	.										.
Template Conservation
Template Sequence		D	E	N	G	R	E	K	S	V	I	M	G	C	Y	G	I	G	V	S	R	L	L	S	A	I	V	E	Q	N	A	D	E	R	G	I	N	W	P	T	G	I	A
Template Known Secondary structure			T	T	S																											B	T	T	B	S				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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