Job Description P0A8N7 Confidence 98.85% Date Thu Jan 5 11:08:21 GMT 2012 Rank 76 Aligned Residues 131 % Identity 12% Template c2cj9A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of methanosarcina barkeri seryl-trna2 synthetase complexed with an analog of seryladenylate Resolution 2.3 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																										.																			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.																			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	.	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	.	.	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																										.																			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.														.																			.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		H	G	P	Q	S	A	R	.	.	.	.	I	F	R	T	F	E	K	I	V	L	E	E	L	L	E	P	L	G	Y	R	E	M	I	F	P	K	L	V	T	W	E	V	W	M	K	S	G	H	A	K	G	V	Y	P	E	I	Y	Y	V	C	P	P	Q	T	R	D	P	D	Y	W	E	E	V	A	D	Y	Y	K	V
Template Known Secondary structure									.	.	.	.													T	T	T	T	T	T								S											S	G	G	G	T		G	G	G							B	S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
																			71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.		.	.	100	.	.		.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.								.						.						.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.								.						.						.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V	A	G	C	G	.	.	.	.	.	.	.	P	V	F	Q	L	C	R	.	S	F	R	N	E	.	E	M	G	R	Y	.	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.								.						.						.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.								.						.						.	.										.
Template Conservation																																																																												.
Template Sequence		T	H	E	V	P	T	K	L	I	K	E	K	I	A	E	P	I	G	G	M	C	Y	A	Q	C	P	P	F	W	M	Y	V	A	G	E	T	L	P	N	E	E	I	P	V	K	V	F	D	R	S	G	T	S	H	R	Y	E	S	G	G	I	H	G	I	E	R	V	D	E	F	H	R	I	E	.	I	V	W	I	G
Template Known Secondary structure			S	S										B		S							S	S	S	S	G	G	G	G	G	G	T	T	T					G	G	G		S							S	S								S	S				T	T	S		S							.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	E	E	V	L	K	C	A	E	E	L	H	D	R	Y	M	H	I	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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