Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 18 Aligned Residues 294 % Identity 18% Template c1x55A_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase; PDBTitle: crystal structure of asparaginyl-trna synthetase from pyrococcus2 horikoshii complexed with asparaginyl-adenylate analogue Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V
Query Conservation
Alig confidence																																														.										.	.	.	.	.	.
Template Conservation																																														.										.	.	.	.	.	.
Template Sequence		I	R	T	P	K	A	S	A	I	M	K	V	K	E	T	L	I	M	A	A	R	E	W	L	L	K	D	G	W	H	E	V	F	P	P	I	L	V	T	G	A	V	E	G	.	G	A	T	L	F	K	L	K	Y	.	.	.	.	.	.	F	D	K	Y	A	Y	L	S	Q	S	A	Q	L	Y	L	E	A	A	I	F
Template Known Secondary structure		T	T	S																								T	T								S			S			S	S		.	G	G	G							.	.	.	.	.	.	T	T							S		S
Template Predicted Secondary structure																																														.										.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.
Predicted Secondary structure																						.																																																		.	.	.	.	.	.
Query SS confidence																						.																																																		.	.	.	.	.	.
Query Sequence		A	G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	.	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	S	L	S	Y	Q	Q	A	F	L	R	.	.	.	.	.	.	Y	L	E	I
Query Conservation																						.																																																		.	.	.	.	.	.
Alig confidence		.																				.																																																		.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	G	L	E	K	V	W	S	L	T	P	S	F	R	A	E	K	S	R	T	R	R	H	L	T	E	F	W	H	L	E	L	E	A	A	W	M	D	L	W	D	I	M	K	V	E	E	E	L	V	S	Y	M	V	Q	R	T	L	E	L	R	K	K	E	I	E	M	F	R	D	D	L	T	T	L	K	N	T	E	P
Template Known Secondary structure		.			S														S			T	T			S											T																															T	T		S							T			S
Template Predicted Secondary structure		.
Template SS confidence
			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		D	P	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	.	Q	I	S	T	E	D	H	R	V	A	E	R	F	E	V
Query Conservation																																																																		.
Alig confidence																						.	.																					.	.	.	.	.	.																	.
Template Conservation																						.	.																					.	.	.	.	.	.
Template Sequence		P	F	P	R	I	S	Y	D	E	A	I	D	I	L	Q	S	K	G	V	N	.	.	V	E	W	G	D	D	L	G	A	D	E	E	R	V	L	T	E	E	F	D	.	.	.	.	.	.	R	P	F	F	V	Y	G	Y	P	K	H	I	K	A	F	Y	M	K	E	D	P	N	D	P	R	K	V	L	A	S	D	M
Template Known Secondary structure		S																T	T			.	.			T	T												G	G	G		S	.	.	.	.	.	.	S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S
Template Predicted Secondary structure																						.	.																					.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.							.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		239	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		Y	Y	.	.	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E
Query Conservation				.	.
Alig confidence				.	.																																.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		L	A	P	E	G	Y	G	E	I	I	G	G	S	Q	R	E	D	D	Y	D	K	L	L	N	R	I	L	E	E	G	M	D	P	K	D	.	.	.	.	.	.	.	.	Y	E	W	Y	L	D	L	R	R	Y	G	S	V	P	H	S	G	F	G	L	G	V	E	R	L	V	A	W	V	L	K	L	D	H	I	R	W
Template Known Secondary structure				T	T	T	T									B														T	T			G	G	G	.	.	.	.	.	.	.	.	G						T	T	T	S	S																			T	T		S		G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.									.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		317	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	F	S	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	F	P	R	T	P
Template Known Secondary structure		G	S	S	S			B	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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