Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 10 Aligned Residues 296 % Identity 18% Template c1wydB_ PDB info PDB header:ligase Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V
Query Conservation
Alig confidence																																														.										.	.	.	.	.	.																	.
Template Conservation																																														.										.	.	.	.	.	.																	.
Template Sequence		L	R	R	Q	E	M	Q	A	V	I	K	I	Q	S	L	A	L	K	A	F	R	E	T	L	Y	K	E	G	F	I	E	I	F	T	P	K	I	I	A	S	A	T	E	G	.	G	A	Q	L	F	P	V	I	Y	.	.	.	.	.	.	F	G	K	E	A	F	L	A	Q	S	P	Q	L	Y	K	E	.	L	M	A
Template Known Secondary structure			T	S																								T	T								S			S	S		S	S	T	.	T									.	.	.	.	.	.	T	T							S		S						.
Template Predicted Secondary structure																																														.										.	.	.	.	.	.																	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.
Predicted Secondary structure																							.																																																		.	.	.
Query SS confidence																							.																																																		.	.	.
Query Sequence		A	G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	S	L	S	Y	Q	Q	A	F	L	R	Y	.	.	.	L	E	I	D	P	L
Query Conservation																							.																																																		.	.	.
Alig confidence																							.																																																		.	.	.
Template Conservation
Template Sequence		G	V	V	E	R	V	F	E	V	A	P	A	W	R	A	E	E	S	D	T	P	F	H	L	A	E	F	I	S	M	D	V	E	M	A	F	A	D	Y	N	D	V	M	Q	L	L	E	K	I	L	H	N	I	V	K	T	I	K	E	E	G	K	E	E	L	K	I	L	N	Y	E	P	P	E	V	K	I	P	I	K
Template Known Secondary structure					S																S	S	S			S											S																									S								T								S	S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	.	Q	I	S	T	E	D	H	R	V	A	E	R	F	E	V	Y	Y	K
Query Conservation																																																															.
Alig confidence																			.	.																					.	.	.	.	.																		.
Template Conservation																			.	.																					.	.	.	.	.
Template Sequence		R	L	K	Y	T	E	A	I	E	I	L	R	S	K	G	Y	N	.	.	I	K	F	G	D	D	I	G	T	P	E	L	R	I	L	N	E	E	L	K	.	.	.	.	.	E	D	L	Y	F	I	V	D	W	P	S	D	A	R	P	F	Y	T	K	S	K	S	E	N	P	E	L	S	E	S	F	D	L	I	Y	K
Template Known Secondary structure															T	T			.	.			T	T																S	.	.	.	.	.		S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							T
Template Predicted Secondary structure																			.	.																					.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E	V	I	A	F	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		F	L	E	I	V	S	G	S	T	R	N	H	K	R	E	V	L	E	E	A	L	K	K	K	G	L	K	P	E	S	.	.	.	.	.	.	.	.	F	E	F	F	L	K	W	F	D	Y	G	M	P	P	H	A	G	F	G	M	G	L	A	R	L	M	V	M	L	T	G	I	Q	S	V	K	E	I	V	P	F	P
Template Known Secondary structure		T									B			S										T	T	T			G	G	G	.	.	.	.	.	.	.	.	G					G	G	G	G	S																									T	T	T	T	S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.									380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		322	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	K	K
Template Known Secondary structure			B	T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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