Job Description P0A8N7 Confidence 99.97% Date Thu Jan 5 11:08:21 GMT 2012 Rank 32 Aligned Residues 297 % Identity 11% Template c1wu7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:histidyl-trna synthetase; PDBTitle: crystal structure of histidyl-trna synthetase from2 thermoplasma acidophilum Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	.	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L
Query Conservation																																												.
Alig confidence									.	.	.	.																																.
Template Conservation									.	.	.	.
Template Sequence		F	Y	P	E	D	X	D	.	.	.	.	V	E	K	F	I	F	K	T	A	E	E	A	A	E	A	F	G	F	R	R	I	D	F	P	S	L	E	Y	L	D	L	Y	R	I	K	S	G	E	E	L	L	Q	Q	T	Y	S	F	V	D	K	G	G	R	E	V	T	L	I	P	E	A	T	P	S	T	V	R	X	V
Template Known Secondary structure									.	.	.	.																T	T								S				T					T	T	S		T	T	G	G	G	G	S						T	T	S							S		S
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		86	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.	150	.	.
Predicted Secondary structure							.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Query Sequence		V	A	G	C	G	.	.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	S	.	.	.	.	.	.	.	.	L	S	Y	Q	Q	A
Query Conservation							.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	R	K	D	L	Q	R	P	L	R	W	Y	S	F	P	K	V	W	R	Y	E	E	P	Q	A	G	R	Y	R	E	H	Y	Q	F	N	A	D	I	F	G	S	D	S	P	E	A	D	A	E	V	I	A	L	A	S	S	I	L	D	R	L	G	L	Q	D	I	Y	E	I	R	I	N	S	R	K	I	X	E	E
Template Known Secondary structure		T	T		T	T			S	S															S		S	S			S											S			S																		T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	R	Y	L	E	I	D	P	L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	Q	I	S	T	E	D	H	R	V
Query Conservation
Alig confidence							.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		I	I	G	G	X	.	.	.	.	T	S	S	D	P	F	S	V	F	S	I	I	D	R	Y	H	K	I	S	R	E	E	F	V	D	Q	L	R	S	A	G	I	G	E	D	G	V	S	X	I	A	D	L	C	S	G	T	R	G	I	D	E	X	A	R	I	T	G	K	S	S	E	E	I	A	R	X	A	A	V	E
Template Known Secondary structure					T	T	.	.	.	.		S	S											T	T	T	T	S												T	T															S		B									T	T
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		171	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	F	E	V	Y	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		D	L	L	A	S	Y	G	V	K	N	V	R	Y	D	F	S	I	V	R	G	L	S	Y	Y	T	.	G	I	V	F	E	A	Y	D	R	S	G	Q	F	R	A	I	L	G	G	G	R	Y	D	N	L	A	S	L	X	S	G	E	S	V	P	A	V	G	F	G	X	G	D	A	V	I	S	L	L	L	K	R	E	N
Template Known Secondary structure							T	T								T	T			T	T	T	T	T		S	.	S								T	T	S	S		S		S	S						T	T							S																						T	T
Template Predicted Secondary structure																											.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions