Job Description P0A8N7 Confidence 98.49% Date Thu Jan 5 11:08:21 GMT 2012 Rank 79 Aligned Residues 131 % Identity 9% Template c1g5hA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:mitochondrial dna polymerase accessory subunit; PDBTitle: crystal structure of the accessory subunit of murine mitochondrial2 polymerase gamma Resolution 1.95 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																			60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	G	P	G	H	S	Q	G
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.												.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.												.
Template Sequence		F	G	P	L	G	V	E	.	.	.	.	L	R	K	N	L	A	S	Q	W	W	S	.	S	X	V	V	F	R	E	Q	V	F	A	V	D	S	L	H	Q	E	P	G	S	S	Q	P	R	D	S	A	F	R	L	V	S	P	E	S	I	R	E	I	L	Q	D	S	K	E	Q	L	V	A	F	L	E	N	L	L	K
Template Known Secondary structure		B							.	.	.	.												.			T	T	T		T	T								S							S	S						B
Template Predicted Secondary structure									.	.	.	.												.
Template SS confidence
		73	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90									.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																																							.	.
Query SS confidence																								.	.	.	.	.	.	.	.																																							.	.
Query Sequence		M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V	A	G	C	G	.	.	.	.	.	.	.	.	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	.	.	N	E	V	D	D	L	L	Q	Q	V
Query Conservation																								.	.	.	.	.	.	.	.																																							.	.
Alig confidence																								.	.	.	.	.	.	.	.													.	.	.																								.	.
Template Conservation																																												.	.	.
Template Sequence		T	S	G	K	L	R	A	T	L	L	H	G	A	L	E	H	Y	V	N	C	L	D	L	V	N	R	K	L	P	F	G	L	A	Q	I	G	V	C	F	H	P	V	.	.	.	S	T	R	V	G	E	K	T	E	A	S	L	V	W	F	T	P	T	R	T	S	S	Q	W	L	D	F	W	L	R	H	R	L	L	W
Template Known Secondary structure			S					S		S							T								T	T	T	B	S															.	.	.
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		139	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	C	P	A	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	K	F	A	X	S
Template Known Secondary structure				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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