Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 7 Aligned Residues 310 % Identity 31% Template c1efwA_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from thermus2 thermophilus complexed to trnaasp from escherichia coli Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V
Query Conservation
Alig confidence																																														.	.									.	.	.
Template Conservation																																														.	.									.	.	.
Template Sequence		L	R	R	R	R	M	Q	E	N	L	R	L	R	H	R	V	I	K	A	I	W	D	F	L	D	R	E	G	F	V	Q	V	E	T	P	F	L	T	K	S	T	P	E	G	.	.	A	R	D	F	L	V	P	Y	.	.	.	R	H	E	P	G	L	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	M	L	M	V
Template Known Secondary structure		T	T	S																								T	T								S	S	B				S	S	S	.	.	S								.	.	.	T	T	S	T	T							S		S
Template Predicted Secondary structure																																														.	.									.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.
Query Sequence		A	G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	.	.	.	.	.	.	.	A	A	E	S	L	S	Y	Q	Q	A	F	L	R	Y	L	E	I
Query Conservation																																																										.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	D	R	Y	F	Q	I	A	R	C	F	R	D	E	D	L	R	A	D	R	Q	P	D	F	T	Q	L	D	L	E	M	S	F	V	E	V	E	D	V	L	E	L	N	E	R	L	M	A	H	V	F	R	E	A	L	G	V	E	L	P	L	P	F	P	R	L	S	Y	E	E	A	M	E	R	Y	G	S	D
Template Known Secondary structure		T	T														S				S	S			S											S																						T						S	S														S	S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		160	.	.																																							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	D	L	R	F	G	L	E	L	K	E	V	G	P	L	F	R	Q	S	G	F	R	V	F	Q	E	A	E	S	V	K	A	L	A	L	P	K	A	L	S	R	K	E	V	A	E	L	E	E	V	A	K	R	H	K	A	Q	G	L	A	W	A	R	V	E	E	G	G	F	S	G	G	V	A	K	F	L	E	P
Template Known Secondary structure		S			T	T	S						B		G	G	G	G	T	T		S						T		S								S	S																	S	S		S									T	T				S	T	T					G	G
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
																							183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.													.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	.	.	.	K	P	T	F	V	Y	H	F	P	.	.	.	.	.	.	.	.	.	.	.	.	A	S	Q	A	S	L	A	Q	I	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	E	A	L	L	Q	A	T	E	A	R	P	G	D	T	L	L	F	V	A	G	P	R	K	V	A	A	T	A	L	G	A	V	R	L	R	A	A	D	L	L	G	L	K	R	E	G	F	R	F	L	W	V	V	D	F	P	L	L	E	W	D	E	E	E	E	A	W	T	Y	M	H	H	P	F	T	S	P	H
Template Known Secondary structure		G									T			T	T									S																				T					S										B	S						S	S		S				S	S		T	T	B		B
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.										.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.
Query Sequence		T	E	D	H	R	V	A	E	.	.	.	.	.	.	.	.	.	R	F	E	V	Y	Y	K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V
Query Conservation										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																															.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		P	E	D	L	P	L	L	E	K	D	P	G	R	V	R	A	L	A	Y	D	L	V	L	N	G	V	E	V	G	G	G	S	I	R	I	H	D	P	R	L	Q	A	R	V	F	R	L	.	.	.	.	L	G	I	G	E	E	E	Q	R	E	K	F	G	F	F	L	E	A	L	E	Y	G	A	P	P	H	G	G	I
Template Known Secondary structure		T	T	T	T	T						S	S	S		B	B	S	B						T	T							B	B	B			S											.	.	.	.	T	T																	G	G	G	T			S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.					.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E	V	I	A	F	S	V	D	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	W	G	L	D	R	L	L	A	L	M	T	G	S	P	S	I	R	E	V	I	A	F	P	K	N	K	E
Template Known Secondary structure														T		S	S	G	G	G	G	S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions