Job Description P0A8N7 Confidence 100.00% Date Thu Jan 5 11:08:21 GMT 2012 Rank 11 Aligned Residues 301 % Identity 19% Template c1b8aB_ PDB info PDB header:ligase Chain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	P	S	A	S	I	P	N	L	L	K	R	A	A	I	M	A	E	I	R	R	F	F	A	D	R	G	V	L	E	V	E	T	P	C	M	S	Q	A	T	V	T	D	I	H	L	V	P	F	E	T	R	F	V	G	P	G	H	S	Q	G	M	N	L	W	L	M	T	S	P	E	Y	H	M	K	R	L	L	V
Query Conservation
Alig confidence																																												.												.	.	.	.	.	.
Template Conservation																																												.												.	.	.	.	.	.
Template Sequence		L	R	R	P	E	V	M	A	I	F	K	I	R	S	S	V	F	K	A	V	R	D	F	F	H	E	N	G	F	I	E	I	H	T	P	K	I	I	A	T	A	T	.	E	G	G	T	E	L	F	P	M	K	Y	.	.	.	.	.	.	F	E	E	D	A	F	L	A	E	S	P	Q	L	Y	K	E	I	M	M	A
Template Known Secondary structure		T	T	S																								T	T								S							.	S	S			S							.	.	.	.	.	.	T	T							S		S							G	G	G
Template Predicted Secondary structure																																												.												.	.	.	.	.	.
Template SS confidence
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.		1170	.	.	.	.	.	.	.	.	.	1180							.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.
Predicted Secondary structure																							.															.																																					.	.	.
Query SS confidence																							.															.																																					.	.	.
Query Sequence		A	G	C	G	P	V	F	Q	L	C	R	S	F	R	N	E	E	M	G	R	Y	.	H	N	P	E	F	T	M	L	E	W	Y	R	P	H	.	Y	D	M	Y	R	L	M	N	E	V	D	D	L	L	Q	Q	V	L	D	C	P	A	A	E	S	L	S	Y	Q	Q	A	F	L	R	Y	L	.	.	.	E	I	D	P
Query Conservation																							.															.																																					.	.	.
Alig confidence																							.															.																																					.	.	.
Template Conservation
Template Sequence		S	G	L	D	R	V	Y	E	I	A	P	I	F	R	A	E	E	H	N	T	T	R	H	L	N	E	A	W	S	I	D	S	E	M	A	F	I	E	D	E	E	E	V	M	S	F	L	E	R	L	V	A	H	A	I	N	Y	V	R	E	H	N	A	K	E	L	D	I	L	N	F	E	L	E	E	P	K	L	P	F
Template Known Secondary structure		T	T															S	S			T	T			S											S		S	S																														T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		1201	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		L	S	A	D	K	T	Q	L	R	E	V	A	A	K	L	D	L	S	N	V	A	D	T	E	E	D	R	D	T	L	L	Q	L	L	F	T	F	G	V	E	P	N	I	G	K	E	K	P	T	F	V	Y	H	F	P	A	S	Q	A	S	L	A	.	Q	I	S	T	E	D	H	R	V	A	E	R	F	E	V	Y	Y
Query Conservation																																																																.
Alig confidence																				.	.																											.																.
Template Conservation																				.	.																											.
Template Sequence		P	R	V	S	Y	D	K	A	L	E	I	L	G	D	L	G	K	E	.	.	I	P	W	G	E	D	I	D	T	E	G	E	R	L	L	G	K	Y	M	M	E	N	E	N	A	P	.	L	Y	F	L	Y	Q	Y	P	S	E	A	K	P	F	Y	I	M	K	Y	D	N	K	P	E	I	C	R	A	F	D	L	E	Y
Template Known Secondary structure																T	T			.	.			T	T	S																					S	.						S		B	G	G	G	S		T	T	B				T	T						S
Template Predicted Secondary structure																				.	.																											.
Template SS confidence
		1281	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.			.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.		.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	I	E	L	A	N	G	F	H	E	L	T	D	A	R	E	Q	Q	Q	R	F	E	Q	D	N	R	K	R	A	A	R	G	L	P	Q	H	P	I	D	Q	N	L	I	E	A	L	K	V	G	M	P	D	C	S	G	V	A	L	G	V	D	R	L	V	M	L	A	L	G	A	E	T	L	A	E	V	I	A	F
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		R	G	V	E	I	S	S	G	G	Q	R	E	H	R	H	D	I	L	V	E	Q	I	K	E	K	G	L	N	P	E	S	.	.	.	.	.	.	.	.	F	E	F	Y	L	K	A	F	R	Y	G	M	P	P	H	G	G	F	G	L	G	A	E	R	L	I	K	Q	M	L	D	L	P	N	I	R	E	V	I	L	F
Template Known Secondary structure		T	T									B														T	T			G	G	G	.	.	.	.	.	.	.	.	G					G	G	G	S	S																				T	T		S		G	G	G	S	S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		1358	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.									.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.
		321	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	D	R	R
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		1430	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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