 |
Job Description | P0AEV1 | Confidence | 63.50% | Date | Wed Jan 25 15:20:32 GMT 2012 |
Rank | 250 | Aligned Residues | 103 |
% Identity | 12% | Template | c6reqB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:protein (methylmalonyl-coa mutase); |
PDBTitle: methylmalonyl-coa mutase, 3-carboxypropyl-coa inhibitor complex
|
Resolution | 2.20 Å |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | L | L | D | S | W | F | S | S | L | G | A | T | T | V | . |
. |
L | A | A | D | G | V | D | A | L | E | L | L | G | G | F | T | P | D | L | M | I | C | D | I | A | M | P | R | M | N | . |
. |
G | L | K | L | L | E | H | I | R | N | R | G | D | Q | T | P | V | L | V | I | S | A | T | E | N | M | A | D | I | A |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   | . | . |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|
|   |   |   | . | . |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   | . |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
E | G | F | S | S | P | V | W | H | I | A | G | I | D | T | P | Q | V | E | G | G | T | T | A | E | I | V | E | A | F | K | K | S | G | A | Q | V | A | D | L | C | S | S | A | K | V | Y | A | Q | Q | G | L | E | V | A | K | A | L | K | A | A | G | A | K | A | . |
L | Y | L | S | G | A | F | K | E | F | G | D | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| B |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  | . |  |  |  |  | S |
| G | G | G | G | G | G | G |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
528 | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | |
. | . | . | . | . | . | . | 600 | . | . | . | . | . | . |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | L | R | L | G | V | E | D | V | L | L | K | P | V | K | D | L | N | R | L | R | E | M | V | F | A | C |
Query Conservation |   |
  |   |
|   |   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
A | E | A | E | K | L | I | D | G | R | L | F | M | G | M | D | V | V | D | T | L | S | S | T | L | D | I | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
607 | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|