Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEV1
Confidence99.01%DateWed Jan 25 15:20:32 GMT 2012
Rank122Aligned Residues122
% Identity7%Templatec3klnC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:transcriptional regulator, luxr family; PDBTitle: vibrio cholerae vpst
Resolution3.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40....... ..50.........60.........70...... ...80....
Predicted Secondary structure 







...










.




Query SS confidence 






































. . .




























.







Query Sequence  QILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELL. . . GGFTPDLMICDIAMPRMNGLKLLEHIRNR. GDQTPVLV
Query Conservation   





       
   
   
  
  
    


   ...     



 
  

   
      

  .    


 
Alig confidence 






































...




























.







Template Conservation 






       
   
                             


                             
Template Sequence  NVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVIDYSRISDDVLTDYSSFKHISCPDAKEVI
Template Known Secondary structure  S

SSS
GGGGGGTTT
SGGGG

GGG

TTT
TT
Template Predicted Secondary structure 













































Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   85....90.........100.........110.........120.........130
Predicted Secondary structure 





















Query SS confidence 













































Query Sequence  ISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYPSMFN
Query Conservation 

           
  

 
 
 

      
   
          
Alig confidence 













































Template Conservation                                                
Template Sequence  INCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLT
Template Known Secondary structure 
SS

GGGGGGSTTTT

TT

B

Template Predicted Secondary structure 
























Template SS confidence 













































   88.90.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions