Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEV1
Confidence99.88%DateWed Jan 25 15:20:32 GMT 2012
Rank66Aligned Residues124
% Identity30%Templatec3hdvB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator receiver protein from2 pseudomonas putida
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40....... ..50.........60.........70...... ...
Predicted Secondary structure 














.










.


Query SS confidence 













































.




























.


Query Sequence  TQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELL. GGFTPDLMICDIAMPRMNGLKLLEHIRNR. GDQ
Query Conservation          





       
   
   
  
  
    


   .     



 
  

   
      

  .   
Alig confidence 













































.




























.


Template Conservation          





       
   
   
  
        
   
      



 
       
      

      
Template Sequence  SLVAARPLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLXITDLRXQPESGLDLIRTIRASERAA
Template Known Secondary structure 

S




S
TT
SS
TT
S

SSS
TSTTTT
Template Predicted Secondary structure 


































Template SS confidence 















































































   63......70.........80.........90.........100.........110.........120.........130.........140..
 
   80.........90.........100.........110.........120......
Predicted Secondary structure 



















Query SS confidence 














































Query Sequence  TPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYP
Query Conservation   


 

           
  

 
 
 

      
   
      
Alig confidence 































.













Template Conservation    

  
              
    
 

  .   
   
   
  
Template Sequence  LSIIVVSGDTDVEEAVDVXHLGVVDFLLKPVD. LGKLLELVNKELKI
Template Known Secondary structure 
SS

TT
SSS

.TT
Template Predicted Secondary structure 













.

Template SS confidence 














































   143......150.........160.........170.... .....180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions