Job Description P0AEV1 Confidence 100.00% Date Wed Jan 25 15:20:32 GMT 2012 Rank 1 Aligned Residues 322 % Identity 22% Template c3eq2A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb Resolution 3.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	Q	I	L	I	V	E	D	E	Q	V	F	R	S	L	L	D	S	W	F	S	S	L	G	A	T	T	V	L	A	A	D	G	V	D	A	L	E	L	L	G	G	F	T	P	D	L	M	I	C	D	I	A	M	P	R	M	N	G	L	K	L	L	E	H	I	R	N	R	G	D	Q	T	P	V	L	V	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	T	L	L	I	I	D	D	D	E	V	V	R	E	S	L	A	A	Y	L	E	D	S	N	F	K	V	L	Q	A	L	N	G	L	Q	G	L	Q	I	F	E	S	E	Q	P	D	L	V	I	C	D	L	R	X	P	Q	I	D	G	L	E	L	I	R	R	I	R	Q	T	A	S	E	T	P	I	I	V	L	G
Template Known Secondary structure										S															T	T							S	S											S			S								S	S	S	S		T										T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	T	E	N	M	A	D	I	A	K	A	L	R	L	G	V	E	D	V	L	L	K	P	V	K	D	L	N	R	L	R	E	M	V	F	A	C	L	Y	P	S	M	F	N	S	R	V	E	E	E	E	R	L	F	R	D	W	D	A	M	V	D	N	P	A	A	A	A	K	L	L	Q	E	L	Q	P	P	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence						.	.	.																																																																							.	.	.
Template Conservation						.	.	.
Template Sequence		V	X	S	D	.	.	.	A	V	E	A	L	R	L	G	A	A	D	Y	L	I	K	P	L	E	D	L	A	V	L	E	H	S	V	R	R	A	L	D	R	A	Y	L	R	V	E	N	Q	R	Y	R	D	K	L	E	A	A	N	R	E	L	Q	A	S	L	N	L	L	Q	E	D	Q	N	A	G	R	Q	V	Q	X
Template Known Secondary structure						.	.	.								T		S					S	S		S		T
Template Predicted Secondary structure						.	.	.
Template SS confidence
		88	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	V	I	S	H	C	R	V	N	Y	R	Q	L	V	A	A	D	K	P	G	L	V	L	D	I	A	A	L	S	E	N	D	L	A	F	Y	C	L	D	V	T	R	A	G	H	N	G	V	L	A	A	L	L	L	R	A	L	F	N	G	L	L	Q	E	Q	L	A	H	Q	N	Q	R	L	P	E	L	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	X	L	P	V	T	P	W	S	I	E	G	L	E	F	S	H	R	I	I	S	G	D	F	V	D	Y	F	R	V	D	E	R	R	V	A	F	Y	L	A	D	V	S	G	H	G	A	S	S	A	F	V	T	V	L	L	K	F	X	T	T	R	L	L	Y	E	S	R	R	N	G	T	L	P	E	F	K	P	S	E
Template Known Secondary structure			S	S			T	T				T	T																			T	T	T										S	S		S	T	T	T																		S		S	S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		L	L	K	Q	V	N	H	L	L	R	Q	A	N	L	P	G	Q	F	P	L	L	V	G	Y	Y	H	R	E	L	K	N	L	I	L	V	S	A	G	L	N	A	T	L	.	N	T	G	E	H	Q	V	Q	I	S	N	G	V	P	L	G	T	L	G	N	A	Y	L	N	Q	L	S	Q	R	C	D	A	W	Q	C	Q
Query Conservation																																													.
Alig confidence																																													.																								.	.
Template Conservation																																																																					.	.
Template Sequence		V	L	A	H	I	N	R	G	L	I	N	T	K	L	G	K	H	V	T	X	L	G	G	V	I	D	L	E	K	N	S	L	T	Y	S	I	G	G	H	L	P	L	P	V	L	F	V	E	G	Q	A	G	Y	L	E	G	R	P	V	G	L	F	D	D	A	D	D	.	.	R	V	X	E	L	P	P	S	F	S	L
Template Known Secondary structure													T	T														T	T	T	T								S	S	S								T	T											S								.	.							S	S
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	G	T	G	G	R	L	R	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	F	S	D	G	I	L	D	T	L
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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