Job Description P0AEV1 Confidence 79.21% Date Wed Jan 25 15:20:32 GMT 2012 Rank 194 Aligned Residues 93 % Identity 18% Template c1qzwC_ PDB info PDB header:signaling protein/rna Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the complete core of archaeal srp and2 implications for inter-domain communication Resolution 4.10 Å

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		7	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.																									.	.	.	.	.	.	.																				.	.
Query SS confidence												.	.	.																									.	.	.	.	.	.	.																				.	.
Query Sequence		G	K	Q	I	L	I	V	E	D	E	.	.	.	Q	V	F	R	S	L	L	D	S	W	F	S	S	L	G	A	T	T	V	L	A	A	D	G	.	.	.	.	.	.	.	V	D	A	L	E	L	L	G	G	F	T	P	D	L	M	I	C	D	I	.	.	A	M	P	R	M	N	G	L	K	L	L	E	H	I	R
Query Conservation												.	.	.																									.	.	.	.	.	.	.																				.	.
Alig confidence												.	.	.																									.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		G	Y	K	V	G	L	V	A	A	D	V	Y	R	P	A	A	Y	D	Q	L	L	Q	L	G	N	Q	I	G	V	Q	V	Y	G	E	P	N	N	Q	N	P	I	E	I	A	K	K	G	V	D	I	F	V	K	N	K	M	D	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	T	K	L	L	E	E	M	K
Template Known Secondary structure		S					B						S	S	S		S											T	T							S	S				T	T													T	T		S									S			S	S	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		75	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		N	R	.	.	.	.	G	D	Q	T	P	V	L	V	I	S	A	T	E	N	M	A	D	I	A	K	A	L	R
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		E	M	Y	D	V	L	K	P	D	D	V	I	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	R
Template Known Secondary structure										S								T	T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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