Job Description P0AEV1 Confidence 99.92% Date Wed Jan 25 15:20:32 GMT 2012 Rank 8 Aligned Residues 136 % Identity 26% Template c1ny5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	I	V	E	D	E	Q	V	F	R	S	L	L	D	S	W	F	S	S	L	G	A	T	T	V	L	A	A	D	G	V	D	A	L	E	L	L	G	G	F	T	P	D	L	M	I	C	D	I	A	M	P	R	M	N	G	L	K	L	L	E	H	I	R	N	R	G	D	Q	T	P	V	L	V	I	S	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	L	V	I	E	D	D	K	V	F	R	G	L	L	E	E	Y	L	S	M	K	G	I	K	V	E	S	A	E	R	G	K	E	A	Y	K	L	L	S	E	K	H	F	N	V	V	L	L	D	L	L	L	P	D	V	N	G	L	E	I	L	K	W	I	K	E	R	S	P	E	T	E	V	I	V	I	T	G	H
Template Known Secondary structure																								T							S	S											S			S						S	B		S	S	S	B													T	T	S								T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	M	A	D	I	A	K	A	L	R	L	G	V	E	D	V	L	L	K	P	V	K	D	L	N	R	L	R	E	M	V	F	A	C	L	Y	P	S	M	F	N	S	R	V	E	E	E	E	R	L	F	R	D	W	D	A
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		G	T	I	K	T	A	V	E	A	M	K	M	G	A	Y	D	F	L	T	K	P	C	M	L	.	E	E	I	E	L	T	I	N	K	A	I	E	H	R	K	L	R	K	E	N	E	L	L	R	R	E	K	D	L	K	E	E
Template Known Secondary structure		T										T	T	T								S				.																													T	T
Template Predicted Secondary structure																										.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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