|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | K | L | S | L | L | L | K | D | A | G | I | S | L | T | D | H | Q | K | N | Q | L | I | A | Y | V | N | M | L | H | K | W | N | K | A | Y | N | L | T | S | V | R | D | P | N | E | M | L | V | R | H | I | L | D | S | I | V | V | A | P | Y | L | Q | G | E | R | F | I | D | V | G | T | G | P | G | L | P | G | I | P |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |
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|   |
Alig confidence |   |
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| . | . | . | . | . | . |
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| . | . | . | . | . | . |
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Template Conservation |   |
  |   |
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|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |
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|   |   |   |
Template Sequence |   |
S | R | L | W | Q | Y | L | L | S | R | S | M | R | E | H | P | A | L | R | S | L | R | L | . |
. |
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L | T | L | E | Q | P | Q | G | D | S | M | M | T | C | E | Q | A | Q | L | L | A | . |
. |
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. |
. |
N | L | A | R | L | I | Q | A | K | K | A | L | D | L | G | T | F | T | G | Y | S | A | L | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  | T | T |
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|  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  | T | S | T | T | G | G | G | S |
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| T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |
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Template SS confidence |   |
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  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
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. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
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. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
. | . | . | 120 | . | . | . | . | . | . | |
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. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
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| . |
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| . |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
L | S | I | V | R | P | E | . |
A | H | F | T | L | L | D | S | L | G | K | R | V | R | F | L | R | Q | V | Q | H | E | L | K | L | E | N | . |
I | E | P | V | Q | S | R | V | E | E | . |
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F | P | S | E | P | P | F | D | G | V | I | S | R | A | F | . |
A | S | L | N | D | M | V | S | W | C | H |
Query Conservation |   |
|
|   |   |   |
|   | . |   |   |
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|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
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|   |
|   |
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|   | . |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . |
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| . |
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Template Conservation |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
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|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
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|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | L | A | L | P | A | D | G | R | V | V | T | C | E | V | D | A | Q | P | P | E | L | G | R | P | L | W | R | Q | A | E | A | E | H | K | I | D | L | R | L | K | P | A | L | E | T | L | D | E | L | L | A | A | G | E | A | G | T | F | D | V | A | V | V | D | A | D | K | E | N | C | S | A | Y | Y | E | R | C | L |
Template Known Secondary structure |   |
 |  | T | T | S |
| T | T |
|  |  |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  |
| S |
| S | T | T |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |
Query SS confidence |   |
|
|
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Query Sequence |   |
H | L | P | G | E | Q | G | R | F | Y | A |
Query Conservation |   |
  |   |
|
|   |
|
|   |   |
|   |
Alig confidence |   |
|
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Template Conservation |   |
  |   |
|
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|   |
|
|   |
Template Sequence |   |
Q | L | L | R | P | G | G | I | L | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |
Template SS confidence |   |
|
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  |   |
200 | . | . | . | . | . | . | . | . | . | 210 |
  |