|   |
52 | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
. | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
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|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
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|
| . |
|
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| . |
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|
Query Sequence |   |
R | H | I | L | D | S | I | V | . |
V | A | P | Y | L | Q | G | E | R | F | I | D | V | G | T | G | P | G | L | P | G | I | P | L | S | I | V | R | P | E | A | H | F | T | L | L | D | S | L | G | K | R | V | R | F | L | R | Q | V | Q | H | E | L | K | L | E | N | . |
I | E | P | V | Q | S | R | V | E | E | F | P | S |
Query Conservation |   |
  |
|
|   |
|
|
|   | . |   |   |   |   |   |   |   |   |   |
|
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|   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
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|
| . |
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| . | . |
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| . |
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|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
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|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   | . | . |   |
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
P | L | I | I | N | S | I | I | D | K | A | A | L | R | P | T | D | V | V | L | E | V | G | P | G | T | G | N | M | T | V | K | L | L | E | K | A | K | . |
. |
K | V | V | A | C | E | L | D | P | R | L | V | A | E | L | H | K | R | V | Q | G | T | P | V | A | S | K | L | Q | V | L | V | G | D | V | L | K | T | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|
| T | T |
|  |  |  |  |  |
|
| T | T | S | T | T |  |  |  |  |  |  |  | S | S | . | . |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | G | G | G |  |  |  |  |  | S |
| T | T | T | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
|
| . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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Template SS confidence |   |
|
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  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
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180 | . | . | . | . | . | . | . | . | . | |
|
|
|
190 | . |
Predicted Secondary structure |   |
|
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|
|  |  |  |  |
|
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|
|  | . |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
Query SS confidence |   |
|
|
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|
|
|
|
|
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|
|
| . |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
| . |
. |
. |
. |
|
|
Query Sequence |   |
E | P | P | F | D | G | V | I | S | R | A | F | A | S | L | . |
N | D | M | V | S | W | C | H | H | L | P | G | E | Q | G | R | F | Y | A | L | K | G | Q | M | P | E | D | E | I | A | L | L | P | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | Q | V | E | S | V | V | K | L | Q | . |
. |
. |
. |
V | P |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|
|
|   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|
Alig confidence |   |
. |
|
|
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|
|
|
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|
|
|
|
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|
| . |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
Template Conservation |   |
. |   |   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |
|   |
|
|   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
. |
P | F | F | D | T | C | V | A | N | L | P | Y | Q | I | S | S | P | F | V | F | K | L | L | L | H | R | P | F | F | R | C | A | I | L | M | F | Q | R | E | F | A | L | R | L | V | A | K | P | G | D | K | L | Y | C | R | L | S | I | N | T | Q | L | L | A | R | V | D | H | L | M | K | V | G | K | N | N | F | R | P |
Template Known Secondary structure |   |
. |
|
|
| S |  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |
| T | T |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  | S |
Template Predicted Secondary structure |   |
. |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
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|
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|
|
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|
  |   |
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
  |   |
192 | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | D | G | E | R | H | L | V | V | I | K | A | N | K |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|
|
|
|   |   |   |
|   |   |
Template Sequence |   |
P | P | K | V | E | S | S | V | V | R | I | E | P | K | N |
Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |