Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6U5
Confidence98.53%DateThu Jan 5 11:03:55 GMT 2012
Rank276Aligned Residues108
% Identity16%Templatec3uzuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal rna small subunit methyltransferase a; PDBTitle: the structure of the ribosomal rna small subunit methyltransferase a2 from burkholderia pseudomallei
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70.........80...... ...90.........100.........110.........120.......
Predicted Secondary structure 








..



















Query SS confidence 




































. .








































Query Sequence  LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIV. . RPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF
Query Conservation     

 


          






 
   
 

  .. 
   
  

   
             
             
Alig confidence 












...




















..























....












Template Conservation 
   

       ...   




 
 
 

  

         
  



      
     ....    
   
 
  
Template Sequence  VIDAIVAAIRPER. . . GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFG. . . . ELLELHAGDALTF
Template Known Secondary structure 


T...T


TTSTT
BTTB


G....GGS
GGG
Template Predicted Secondary structure 




...















....



Template SS confidence 















































































   26...30........ .40.........50.........60.........70.........80..... ....90........
 
   128.130 .........140..... ....150.........160....
Predicted Secondary structure 


.......








.




Query SS confidence 


. . . . . . .














.


















Query Sequence  PSE. . . . . . . PPFDGVISRAFASLN. DMVSWCHHLPGEQGRFYAL
Query Conservation     .......  

 
 


     .  
      

 

  
  
Alig confidence 


.......














.


















Template Conservation 
   
          

 



 


 

  

           
Template Sequence  DFGSIARPGDEPSLRIIGNLPYNISSPLLFHLMSFAPVVIDQHFM
Template Known Secondary structure 
GGGGS
SSSS



GGGGGG
Template Predicted Secondary structure 
















Template SS confidence 












































   99100.........110.........120.........130.........140...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions