Job Description P0A6U5 Confidence 65.09% Date Thu Jan 5 11:03:55 GMT 2012 Rank 405 Aligned Residues 71 % Identity 17% Template c3trkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease Resolution 2.40 Å

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		131	.	.	.	.	.	.	.	.																140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Query Sequence		P	P	F	D	G	V	I	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	A	S	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	.	.	.	.	L	K	G	Q	M	P	E	D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V	P
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		G	R	Y	D	L	V	V	I	N	I	H	T	P	F	R	I	H	H	Y	Q	Q	C	V	D	H	A	X	K	L	Q	X	L	G	G	D	S	L	R	L	L	K	P	G	G	S	L	L	I	R	A	Y	G	Y	A	D	R	T	S	E	R	V	I	C	V	L	G	R	K	F	R	S	S	R	A	L	K	P	P	C	V
Template Known Secondary structure																	S	S																			G	G	G	G																S												T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		1212	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.
		192	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	G	E	R	H	L	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	N	T	E	X	F	F	L	F
Template Known Secondary structure			B	T	T
Template Predicted Secondary structure
Template SS confidence
		1292	.	.	.	.	.	.	.	1300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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