Job Description P0A6U5 Confidence 99.54% Date Thu Jan 5 11:03:55 GMT 2012 Rank 98 Aligned Residues 135 % Identity 16% Template c3q87B_ PDB info PDB header:transferase activator/transferase Chain: B: PDB Molecule:n6 adenine specific dna methylase; PDBTitle: structure of eukaryotic translation termination complex2 methyltransferase mtq2-trm112 Resolution 2.00 Å

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		56	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure											.	.	.	.	.
Query SS confidence											.	.	.	.	.
Query Sequence		D	S	I	V	V	A	P	Y	L	.	.	.	.	.	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	S	E
Query Conservation											.	.	.	.	.
Alig confidence											.	.	.	.	.																				.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.																					.	.	.	.	.	.	.	.	.
Template Sequence		D	T	Y	T	L	M	D	A	L	E	R	E	G	L	E	M	K	I	V	L	D	L	G	T	S	T	G	V	I	T	E	Q	L	.	.	.	R	K	R	N	T	V	V	S	T	D	L	N	I	R	A	L	E	S	H	R	.	.	.	.	.	.	.	.	.	G	G	N	L	V	R	A	D	L	L	C	S	I	N	Q
Template Known Secondary structure														T			S							T		T	T								.	.	.	T	T	T	S							S							T		S	.	.	.	.	.	.	.	.	.	S	S						S	T	T	T	T	S		G
Template Predicted Secondary structure																																			.	.	.																					.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.										.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		131	.	.	.	.	.	.	.														.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Query Sequence		P	P	F	D	G	V	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	F	A	S	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	K	G	Q	M	P	E	D	E	I	A	L	L	P	E	.	.	E	Y	Q	V	E	S	V	V	K	L	Q	V	P	A	L	D	G
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.																	.
Template Conservation																																																																																	.
Template Sequence		E	S	V	D	V	V	V	F	N	P	P	Y	V	P	D	T	D	D	P	I	I	G	G	G	Y	L	G	R	E	V	I	D	R	F	V	D	A	V	T	V	G	M	L	Y	L	L	V	I	E	A	N	R	P	K	E	V	L	A	R	L	E	E	R	G	Y	G	T	R	I	L	K	V	R	K	I	L	G	E	T	.
Template Known Secondary structure		G	G		S									B	T	T				T	T	T	B			G	G	G													S	S								G	G	G												T	T												S	S	S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	H	L	V	V	I	K	A	N	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	Y	I	I	K	G	E	K
Template Known Secondary structure		.	.	.
Template Predicted Secondary structure		.	.	.
Template SS confidence
					156	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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