Job Description P0A6U5 Confidence 99.52% Date Thu Jan 5 11:03:55 GMT 2012 Rank 111 Aligned Residues 174 % Identity 13% Template c3ofkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah) Resolution 1.85 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	N	M	L	H	K	W	N	K	A	Y	N	L	T	S	V	R	D	P	N	E	M	L	V	R	H	I	L	D	S	I	V	V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		T	Y	Q	S	L	E	R	E	L	A	N	D	D	P	W	R	L	D	D	N	P	F	E	R	E	R	H	T	Q	L	L	R	L	S	L	S	S	G	A	V	S	N	G	L	E	I	G	C	A	A	G	A	F	T	E	K	L	A	.	.	P	H	C	K	R	L	T	V	I	D	V	M	P	R	A	I	G	R	A	C
Template Known Secondary structure											T	S	S	S	G	G	G	T	T	T																T	T	T	S	S										T	T	S							G	.	.	G	G									S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.												.
Predicted Secondary structure																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	S	E	P	P	F	D	G	V	I	S	R	A	F	A	S	.	.	.	.	.	.	.	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	K	G	Q	.	.	.	.	.	.	.	.	.	.	.	M
Query Conservation																																							.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																													.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		Q	R	T	K	R	W	S	.	.	H	I	S	W	A	A	T	D	I	L	Q	F	S	T	A	E	L	F	D	L	I	V	V	A	E	V	L	Y	Y	L	E	D	M	T	Q	M	R	T	A	I	D	N	M	V	K	M	L	A	P	G	G	H	L	V	F	G	S	A	R	D	A	T	C	R	R	W	G	H	V	A	G
Template Known Secondary structure				T	T	T		S	.	.	S								T	T	T				S										S		G	G	G	S	S	S														T																				T	T		S
Template Predicted Secondary structure									.	.
Template SS confidence
		84	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V	P	A	L	D	G	E	R	H	L	V	V	I	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	T	V	I	T	I	L	T	E	A	L	T	E	V	E	R	V	Q	C	Q	G	Q	S	A	D	E	D	C	L	L	A	R	F	R	N
Template Known Secondary structure													S											S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions