Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6U5
Confidence98.91%DateThu Jan 5 11:03:55 GMT 2012
Rank248Aligned Residues118
% Identity20%Templatec3m6wA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rrna methylase; PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.... .....90.........100.........110.........120........ .130......
Predicted Secondary structure 








.




















.





Query SS confidence 

























.











































.







Query Sequence  VVAPYLQGERFIDVGTGPGLPGIPLS. IVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP. SEPPFDGV
Query Conservation            






 
   
 

.   
   
  

   
             
              .    

 
Alig confidence 

























.











































.







Template Conservation    
   

  












 

  
   
 




    
   
  

 
 
   


  
   
       

 
Template Sequence  VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRV
Template Known Secondary structure 


TT
SS
TT
TTT
S
S





S

S
Template Predicted Secondary structure 


































Template SS confidence 















































































   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   137..140 .........150.........160.........170......
Predicted Secondary structure 

..........................











Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . . . . . .



































Query Sequence  ISRA. . . . . . . . . . . . . . . . . . . . . . . . . . FASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALL
Query Conservation   


..........................       
      

 

  
  

     
    
Alig confidence 



..........................



































Template Conservation 







 
  

 
     

         

  

  
   




 






   



 
Template Sequence  LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGV
Template Known Secondary structure 




GGGTTT
TTSGGG

TTTTS


GGGT
Template Predicted Secondary structure 

























Template SS confidence 

































































   175....180.........190.........200.........210.........220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions