 |
Job Description | P0A6U5 | Confidence | 73.06% | Date | Thu Jan 5 11:03:55 GMT 2012 |
Rank | 393 | Aligned Residues | 31 |
% Identity | 32% | Template | c3k1qA_ |
PDB info |
PDB header:virus | Chain: A: PDB Molecule:vp1, the protein that forms the mrna-capping |
PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics
|
Resolution | 4.50 Å |
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | F | I | D | V | G | T | G | P | G | L | P | G | I | P | L | S | I | V | R | P | E | A | H | F | T | L | L | D | S | L | G |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
| . | . |
|
|
|   |   |   |
|
|   |   |
|
|
|
|
Template Sequence |   |
A | H | L | L | D | L | G | T | G | P | E | C | R | I | L | S | L | . |
. |
I | P | P | T | L | Q | V | T | M | S | D | S | R | P |
Template Known Secondary structure |   |
|  |  |  |  |  | S |
|
| T | T |
| T |  |  |  |  | . | . | S |
| T | T |
|  |  |  |  |  |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
829 | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | |
|
. | . | . | . | 850 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|