Job Description P0A6U5 Confidence 99.26% Date Thu Jan 5 11:03:55 GMT 2012 Rank 212 Aligned Residues 111 % Identity 15% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		53	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure															.																																																																		.
Query SS confidence															.																																																																		.
Query Sequence		H	I	L	D	S	I	V	V	A	P	Y	L	Q	.	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	S	E	.
Query Conservation															.																																																																		.
Alig confidence															.																																																																		.
Template Conservation
Template Sequence		T	G	A	R	A	F	I	D	A	H	Q	D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	P	Q	S	R	N	T	V	V	E	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	P	R	A	P	R	V	K	I	R	V	D	D	A	R	X	V	A	E	S	F
Template Known Secondary structure												S		G	G	G							S		G	G	G										S	T	T								S												S					T	T	T						S								T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
				131	.	.	.	.	.	.	.	.	140	.	.	.	.									.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.															.	.	.	.	.	.	.	.
Query SS confidence		.	.															.	.	.	.	.	.	.	.
Query Sequence		.	.	P	P	F	D	G	V	I	S	R	A	F	A	S	L	.	.	.	.	.	.	.	.	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A
Query Conservation		.	.															.	.	.	.	.	.	.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A
Template Known Secondary structure			T	T										S	T	T	S				G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions