Job Description P0A6U5 Confidence 99.04% Date Thu Jan 5 11:03:55 GMT 2012 Rank 237 Aligned Residues 110 % Identity 10% Template c3fydA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable dimethyladenosine transferase; PDBTitle: crystal structure of dim1 from the thermophilic archeon,2 methanocaldococcus jannaschi Resolution 1.75 Å

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		52	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.
Predicted Secondary structure										.																																																																						.
Query SS confidence										.																																																																						.
Query Sequence		R	H	I	L	D	S	I	V	.	V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	.	S
Query Conservation										.																																																																						.
Alig confidence										.																														.	.																								.	.														.
Template Conservation																																								.	.																								.	.
Template Sequence		K	N	F	V	N	K	A	V	E	S	A	N	L	T	K	D	D	V	V	L	E	I	G	L	G	K	G	I	L	T	E	E	L	A	K	N	A	K	.	.	K	V	Y	V	I	E	I	D	K	S	L	E	P	Y	A	N	K	L	K	E	L	Y	N	.	.	N	I	E	I	I	W	G	D	A	L	K	V	D	L	N
Template Known Secondary structure												T	T			T	T									T	T	S										S	S	.	.							S		G	G	G												S	.	.	S						S		T	T	T	S		G	G
Template Predicted Secondary structure																																								.	.																								.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	P	P	F	D	G	V	I	S	R	A	F	A	S	L	.	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	K
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		K	L	D	F	N	K	V	V	A	N	L	P	Y	Q	I	S	S	P	I	T	F	K	L	I	K	R	G	F	D	L	A	V	L	M	Y	Q	Y
Template Known Secondary structure		G				S								G	G	G														S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions