Job Description P0A6U5 Confidence 99.64% Date Thu Jan 5 11:03:55 GMT 2012 Rank 33 Aligned Residues 142 % Identity 15% Template c3eeyJ_ PDB info PDB header:transferase Chain: J: PDB Molecule:putative rrna methylase; PDBTitle: crystal structure of putative rrna-methylase from clostridium2 thermocellum Resolution 2.20 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																															.															.	.												.
Query SS confidence																						.																															.															.	.												.
Query Sequence		Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	.	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	.	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	.	.	S	E	P	P	F	D	G	V	I	S	R	.
Query Conservation																						.																															.															.	.												.
Alig confidence																						.																															.															.	.												.
Template Conservation
Template Sequence		E	G	D	T	V	V	D	A	T	C	G	N	G	N	D	T	A	F	L	A	S	L	V	G	E	N	G	R	V	F	G	F	D	I	Q	D	K	A	I	A	N	T	T	K	K	L	T	D	L	N	L	I	D	R	V	T	L	I	K	D	G	H	Q	N	M	D	K	Y	I	D	C	P	V	K	A	V	M	F	N	L
Template Known Secondary structure		T	T						S			T	T	S												T	T								S															T	T		G	G	G						S		G	G	G	G	G	G	T			S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
														140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	F	A	S	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	.	.	.	L	K	G	Q	M	P	E	D	E	I	A	L	L	P	E	.	.	.	.	.	.	E	Y	Q	V	E	S	V	V	K	L	Q	V	P	A	L	D	G	E	R	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																.	.	.	.	.	.
Template Conservation
Template Sequence		G	Y	L	P	S	G	D	H	S	I	S	T	R	P	E	T	T	I	Q	A	L	S	K	A	M	E	L	L	V	T	G	G	I	I	T	V	V	I	Y	Y	G	G	D	T	G	F	E	E	K	E	K	V	L	E	F	L	K	G	V	D	Q	K	K	F	I	V	Q	R	T	D	F	I	N	Q	A	N	C	P	P	I
Template Known Secondary structure		S			T	T	S		S	S																																	S	S	S														T	S		T	T	T									T	T			S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	V	I	K	A	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	C	I	E	K	I	S
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions