|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | K | L | S | L | L | L | K | D | A | G | I | S | L | T | D | H | Q | K | N | Q | L | I | A | Y | V | N | M | L | H | K | W | N | K | A | Y | N | L | T | S | V | R | D | P | N | E | M | L | V | R | H | I | L | D | S | I | V | V | A | P | Y | L | Q | G | E | R | F | I | D | V | G | T | G | P | G | L | P | G | I | P |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
| . | . | . |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |
Template Sequence |   |
E | Y | L | R | T | Y | V | E | S | . |
. |
T | T | E | T | D | A | A | V | A | R | A | R | E | D | A | A | E | . |
. |
. |
. |
. |
. |
. |
F | G | L | P | A | P | D | E | X | T | G | Q | L | L | T | T | L | . |
. |
. |
A | A | T | T | N | G | N | G | S | T | G | A | I | A | I | T | P | A | A | G | L | V | G | L | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | . | . | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  | S |
|
| T | T |
|
|  |  |  |  |  | S | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | |
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
83 | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | |
. | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | S | I | V | R | P | . |
E | A | H | F | T | L | L | D | S | L | G | K | R | V | R | F | L | R | Q | V | Q | H | E | L | K | L | . |
. |
E | N | I | E | P | V | Q | S | R | V | E | E | F | P | S | E | . |
. |
. |
P | P | F | D | G | V | I | S | R | A | F | A | . |
S | L | N | D | M | V | S | W | C | H | H | L | P |
Query Conservation |   |
|
|   |   |   |
| . |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|
|   |
|   |
|
|
|   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
I | L | N | G | L | A | D | N | T | T | L | T | C | I | D | P | E | S | E | H | Q | R | Q | A | K | A | L | F | R | E | A | G | Y | S | P | S | R | V | R | F | L | L | S | R | P | L | D | V | X | S | R | L | A | N | D | S | Y | Q | L | V | F | G | Q | V | S | P | X | D | L | K | A | L | V | D | A | A | W | P | L | L |
Template Known Secondary structure |   |
 |  |  |  | S |
| T | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |
| S |
|  |  |  |  | G | G | G | S |
| T | T |
|  |  |  |  |  |  |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | Q | G | R | F | Y | A |
Query Conservation |   |
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|   |
Template Sequence |   |
R | R | G | G | A | L | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
154 | . | . | . | . | . | 160 | . |
  |