Job Description P0A6U5 Confidence 99.56% Date Thu Jan 5 11:03:55 GMT 2012 Rank 89 Aligned Residues 141 % Identity 18% Template c3dmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy Resolution 1.55 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	M	L	V	R	H	I	L	D	S	I	V	V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E
Query Conservation
Alig confidence																		.																						.	.
Template Conservation																		.																						.	.
Template Sequence		S	L	L	L	L	E	A	L	Q	E	R	L	G	P	E	G	.	V	R	G	R	Q	V	L	D	L	G	A	G	Y	G	A	L	T	L	P	L	A	.	.	R	M	G	A	E	V	V	G	V	E	D	D	L	A	S	V	L	S	L	Q	K	G	L	E	A	N	A	L	K	A	Q	A	L	H	S	D	V	D	E	A
Template Known Secondary structure															T	T	T	.	T	T	T							T		T	T	S	T	T						.	.		T	T								S	B														T	T									S	T	T	T	T
Template Predicted Secondary structure																		.																						.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.										.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		F	P	S	E	P	P	F	D	G	V	I	S	R	A	F	A	S	L	.	.	.	.	.	.	.	.	.	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	K	G	Q	.	.	M	P	E	D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V
Query Conservation																				.	.	.	.	.	.	.	.	.																								.	.
Alig confidence																				.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		L	T	E	E	A	R	F	D	I	I	V	T	N	P	P	F	H	V	G	G	A	V	I	L	D	V	A	Q	A	F	V	N	V	A	A	A	R	L	R	P	G	G	V	F	F	L	V	S	N	P	F	L	K	Y	E	P	L	L	E	E	K	F	G	A	F	Q	T	L	K	V	A	E	Y	K	V
Template Known Secondary structure		S		T	T														T	T		S	S																												T	T	S											S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions