Job Description P0A6U5 Confidence 99.55% Date Thu Jan 5 11:03:55 GMT 2012 Rank 96 Aligned Residues 138 % Identity 12% Template c3b89A_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: crystal structure of rrna methylase from escherichia coli Resolution 2.60 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	S	E	P	P	F	D	G	V	I	S	R
Query Conservation
Alig confidence																											.	.	.																												.
Template Conservation																											.	.	.																												.
Template Sequence		I	F	S	A	E	T	P	R	R	V	L	D	I	A	C	G	L	N	P	L	A	L	Y	E	R	.	.	.	G	I	A	S	V	W	G	C	D	I	H	Q	G	L	G	D	V	I	T	P	F	A	R	E	K	D	W	.	D	F	T	F	A	L	Q	D	V	L	C	A	P	P	A	E	A	G	D	L	A	L	I	F
Template Known Secondary structure				S	S				S						T		T	T	T						T	T	.	.	.	T		S							S	B													T	T	T		.									T	T	T	S					B		S
Template Predicted Secondary structure																											.	.	.																												.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.																								.
Query SS confidence				.	.	.	.	.	.																								.
Query Sequence		A	F	.	.	.	.	.	.	A	S	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	.	K	G	Q	M	P	E	D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V	P	A	L	D	G	E	R	H	L	V	V	I	K	A	N
Query Conservation				.	.	.	.	.	.																								.
Alig confidence				.	.	.	.	.	.																								.																												.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		K	L	L	P	L	L	E	R	E	Q	A	G	S	A	X	A	L	L	Q	S	L	N	T	P	R	X	A	V	S	F	P	T	R	S	E	A	N	Y	A	A	W	F	E	G	G	L	P	A	E	F	E	I	E	D	K	K	T	I	G	.	.	.	.	T	E	L	I	Y	L	I	K	K	N
Template Known Secondary structure		S									S	T	T								T		B		S								S					S											T	T										T	.	.	.	.	T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions