 |
Job Description | P0A6U5 | Confidence | 85.02% | Date | Thu Jan 5 11:03:55 GMT 2012 |
Rank | 364 | Aligned Residues | 89 |
% Identity | 11% | Template | c2y0dB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:udp-glucose dehydrogenase; |
PDBTitle: bcec mutation y10k
|
Resolution | 2.80 Å |
|
 |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | |
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
G | P | G | L | P | G | I | P | L | S | . |
. |
I | V | R | P | E | A | H | F | T | L | L | D | S | L | G | K | R | V | R | F | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | Q | V | Q | H | E | L | K | L | E | N | I | E | P | V | Q | S | R | V | E | E | F | P | S | E | P | P | F | D | G | V | I | S | . |
. |
Query Conservation |   |
|   |
|   |   |   |
|   |
|
| . | . |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
Template Sequence |   |
G | S | G | K | V | G | L | V | T | G | A | C | L | A | D | I | G | H | D | V | F | C | L | D | V | D | Q | A | K | I | D | I | L | N | N | G | G | V | P | I | H | E | P | G | L | K | E | V | I | A | R | N | R | S | A | G | R | L | R | F | S | T | D | I | E | A | A | V | A | H | G | D | V | Q | F | I | A | V | G | T |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  | T | T | T |
|
| S | S |
|
| T | T |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
|
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
  |   |
|
|
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
R | A | F | A | S | L | N | D | M | V | S | W | C | H | H | L | P | G | E | Q | G | R | F | Y | A |
Query Conservation |   |
. | . |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |
Template Sequence |   |
P | S | A | D | L | Q | Y | V | L | A | A | A | R | N | I | G | R | Y | M | T | G | F | K | V | I | V | D |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|