Job Description P0A6U5 Confidence 99.17% Date Thu Jan 5 11:03:55 GMT 2012 Rank 224 Aligned Residues 138 % Identity 18% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	S	E	P	P	F	D	G	V	I	S
Query Conservation
Alig confidence																												.	.																																											.	.
Template Conservation																												.	.																																											.	.
Template Sequence		K	V	S	E	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	.	.	K	R	G	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	F	E	V	A	S	D	R	E	V	S	V	.	.	K	G	F	D	T	V	I	V
Template Known Secondary structure									S	S						T		T	T	T								.	.	T	T	T								S															T	T										T	T	T				.	.	T	T		S
Template Predicted Secondary structure																												.	.																																											.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.
		139	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure							.	.																																																.
Query SS confidence							.	.																																																.
Query Sequence		R	A	F	A	S	.	.	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	K	G	Q	M	P	E	D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V	.	P	A	L	D	G	E	R	H	L	V	V	I
Query Conservation							.	.																																																.
Alig confidence							.	.												.																							.													.
Template Conservation																				.																							.
Template Sequence		D	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	.	K	P	G	V	I	V	Y	V	S	C	N	P	E	T	F	A	R	D	V	K	M	L	.	D	Y	R	I	D	E	I	V	A	L	D	M	F	P	H	T	P	H	V	E	L	V	A	K	L
Template Known Secondary structure					T	T		S												.			S							S												T	.	T												S	T	T	S	S
Template Predicted Secondary structure																				.																							.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions