Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6U5
Confidence43.01%DateThu Jan 5 11:03:55 GMT 2012
Rank474Aligned Residues73
% Identity18%Templatec2nvuB_
PDB info PDB header:protein turnover, ligaseChain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.... .....90......... 100.........110.........120
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Query Sequence  LQGERFIDVGTGPGLPGIPLS. . . IVRPEAHFTLLDSLG. . . . . . . . . . . . . . . . . . . . KRVRFLRQVQHELKLENIEPV
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Template Sequence  LDTCKVLVIGAGG. . LGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPH
Template Known Secondary structure  T



SS..TTT



B

GGGGGT
TT

GGGTTSBSTT
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   2046...2050........ .2060.........2070.........2080.........2090.........2100.........2110.........2120...
 
   121........130 ........
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Query Sequence  QSRVEEFPSE. . PPFDGVIS
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Template Sequence  FNKIQDFNDTFYRQFHIIVC
Template Known Secondary structure  S
GGGS
T
S
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   2124.....2130.........2140...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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