Job Description P0A6U5 Confidence 43.01% Date Thu Jan 5 11:03:55 GMT 2012 Rank 474 Aligned Residues 73 % Identity 18% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	.	.	.	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V
Query Conservation																							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		L	D	T	C	K	V	L	V	I	G	A	G	G	.	.	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	V	P	N	C	N	V	V	P	H
Template Known Secondary structure				T									S	S	.	.											T	T	T											B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													S	T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		2046	.	.	.	2050	.	.	.	.	.	.	.	.			.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.
		121	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		Q	S	R	V	E	E	F	P	S	E	.	.	P	P	F	D	G	V	I	S
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C
Template Known Secondary structure			S		G	G	G	S							T		S
Template Predicted Secondary structure
Template SS confidence
		2124	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions