Job Description P0A6U5 Confidence 99.29% Date Thu Jan 5 11:03:55 GMT 2012 Rank 205 Aligned Residues 157 % Identity 8% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		D	P	N	E	M	L	V	R	H	I	L	D	S	I	V	V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	.	.	.	.	V	Q	H	E	L	K	L	E	N	I	E	P	V
Query Conservation																																																																	.	.	.	.
Alig confidence																																																																	.	.	.	.
Template Conservation
Template Sequence		E	K	D	E	F	A	Y	H	E	M	M	T	H	V	P	M	T	V	S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F
Template Known Secondary structure		T	T	T														T	T	S	S	S										T	T									T		T	T									S																	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure										.	.																																									.	.	.	.	.	.
Query SS confidence										.	.																																									.	.	.	.	.	.
Query Sequence		Q	S	R	V	E	E	F	P	.	.	S	E	P	P	F	D	G	V	I	S	R	A	F	A	S	L	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	L	K	G	Q	M	.	.	.	.	.	.	P	E	D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V	P	A
Query Conservation										.	.																																									.	.	.	.	.	.
Alig confidence										.	.																.																									.	.	.	.	.	.
Template Conservation																											.
Template Sequence		I	E	D	A	S	K	F	L	E	N	V	T	N	T	Y	D	V	I	I	V	D	S	S	D	N	.	Q	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y	C	V	A	Q	C	E	S	L	W	I	H	V	G	T	I	K	N	M	I	G	Y	A	K	K	L	F	K	K	V	E	Y	A	N	I	S	I	P	T
Template Known Secondary structure			S								T			S													.																								T	T	T														T	T		S										T	T
Template Predicted Secondary structure																											.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	E	R	H	L	V	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	P	C	G	C	I	G	I	L	C
Template Known Secondary structure		S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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