Job Description P0A6U5 Confidence 98.50% Date Thu Jan 5 11:03:55 GMT 2012 Rank 278 Aligned Residues 145 % Identity 17% Template c1g38A_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:modification methylase taqi; PDBTitle: adenine-specific methyltransferase m. taq i/dna complex Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																												.
Query SS confidence										.																												.
Query Sequence		R	H	I	L	D	S	I	V	.	V	A	P	Y	L	Q	G	E	R	F	I	D	V	G	T	G	P	G	L	P	G	I	P	L	S	I	V	.	R	P	E	A	H	F	T	L	L	D	S	L	G	K	R	V	R	F	L	R	Q	V	Q	H	E	L	K	L	E	N	I	E	P	V	Q	S	R	V	E	E	F	P	S
Query Conservation										.																												.
Alig confidence										.																												.																							.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.
Template Sequence		P	E	V	V	D	F	M	V	S	L	A	E	A	P	R	G	G	R	V	L	E	P	A	C	A	H	G	P	F	L	R	A	F	R	E	A	H	G	T	G	Y	R	F	V	G	V	E	I	D	P	K	A	L	D	L	P	P	W	A	.	.	.	.	.	.	.	.	.	E	G	I	L	A	D	F	L	L	W	E	P
Template Known Secondary structure										T	T					T	T							T		T	T													S		S							S		T	T	T					T	T	S	.	.	.	.	.	.	.	.	.					S		G	G	G
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																																		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		E	P	P	F	D	G	V	I	S	R	A	F	A	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	M	V	S	W	C	H	H	L	P	G	E	Q	G	R	F	Y	A	.	.	.	.	.	.	L	K	G	Q	M	P	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	A	F	D	L	I	L	G	N	P	P	Y	G	I	V	G	E	A	S	K	Y	P	I	H	V	F	K	A	V	K	D	L	Y	K	K	A	F	S	T	W	K	G	K	Y	N	L	Y	G	A	F	L	E	K	A	V	R	L	L	K	P	G	G	V	L	V	F	V	V	P	A	T	W	L	V	L	E	D	F	A
Template Known Secondary structure		S	S														B	S		T	T	T		S	B															T	T			T	T																											S	G	G	G	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		D	E	I	A	L	L	P	E	E	Y	Q	V	E	S	V	V	K	L	Q	V	.	.	P	A	L	D	G	E	R	H	L	V	V	I	K	A	N	K
Query Conservation																						.	.
Alig confidence											.											.	.
Template Conservation											.
Template Sequence		L	L	R	E	F	L	A	R	E	.	G	K	T	S	V	Y	Y	L	G	E	V	F	P	Q	K	K	V	S	A	V	V	I	R	F	Q	K	S	G
Template Known Secondary structure											.	S									S		S	T	T												S	S	S
Template Predicted Secondary structure											.
Template SS confidence
		176	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions