Email l.a.kelley@imperial.ac.uk Description P09153 Date Thu Jan 5 11:02:01 GMT 2012 Unique Job ID 30ff869a82790588

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2kz6A_ 97.7 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein cv0426 from chromobacterium violaceum,2 northeast structural genomics consortium (nesg) target cvt2 2 c2jxwA_ 69.3 34 PDB header:formin binding protein Chain: A: PDB Molecule:ww domain-binding protein 4; PDBTitle: solution structure of the tandem ww domains of fbp21 3 c2kt9A_ 61.6 28 PDB header:ribosomal protein Chain: A: PDB Molecule:probable 30s ribosomal protein psrp-3; PDBTitle: solution nmr structure of probable 30s ribosomal protein2 psrp-3 (ycf65-like protein) from synechocystis sp. (strain3 pcc 6803), northeast structural genomics consortium target4 target sgr46 4 c1tk7A_ 27.5 20 PDB header:signaling protein Chain: A: PDB Molecule:cg4244-pb; PDBTitle: nmr structure of ww domains (ww3-4) from suppressor of2 deltex 5 c2c7hA_ 26.2 24 PDB header:ubiquitin-like protein Chain: A: PDB Molecule:retinoblastoma-binding protein 6, isoform 3; PDBTitle: solution nmr structure of the dwnn domain from human rbbp6 6 c1w18A_ 23.9 20 PDB header:transferase Chain: A: PDB Molecule:levansucrase; PDBTitle: crystal structure of levansucrase from gluconacetobacter2 diazotrophicus 7 d1o6wa1 23.1 35 Fold:WW domain-like Superfamily:WW domain Family:WW domain 8 c2ov2O_ 22.6 10 PDB header:protein binding/transferase Chain: O: PDB Molecule:serine/threonine-protein kinase pak 4; PDBTitle: the crystal structure of the human rac3 in complex with the crib2 domain of human p21-activated kinase 4 (pak4) 9 c1rfoC_ 20.9 25 PDB header:viral protein Chain: C: PDB Molecule:whisker antigen control protein; PDBTitle: trimeric foldon of the t4 phagehead fibritin 10 c2odbB_ 20.5 10 PDB header:protein binding Chain: B: PDB Molecule:serine/threonine-protein kinase pak 6; PDBTitle: the crystal structure of human cdc42 in complex with the crib domain2 of human p21-activated kinase 6 (pak6) 11 d1x4ta1 19.3 27 Fold:Long alpha-hairpin Superfamily:ISY1 domain-like Family:ISY1 N-terminal domain-like 12 d2ghsa1 17.2 16 Fold:6-bladed beta-propeller Superfamily:Calcium-dependent phosphotriesterase Family:SGL-like 13 c2ghsA_ 17.2 16 PDB header:calcium-binding protein Chain: A: PDB Molecule:agr_c_1268p; PDBTitle: crystal structure of a calcium-binding protein, regucalcin2 (agr_c_1268) from agrobacterium tumefaciens str. c58 at 1.55 a3 resolution 14 c2xv5A_ 16.1 13 PDB header:structural protein Chain: A: PDB Molecule:lamin-a/c; PDBTitle: human lamin a coil 2b fragment 15 c1e0aB_ 14.7 30 PDB header:signalling protein Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: cdc42 complexed with the gtpase binding domain of p212 activated kinase 16 c1gk6B_ 14.4 14 PDB header:vimentin Chain: B: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b) 17 c1zr7A_ 14.2 39 PDB header:signaling protein Chain: A: PDB Molecule:huntingtin-interacting protein hypa/fbp11; PDBTitle: solution structure of the first ww domain of fbp11 18 c2dk7A_ 14.1 21 PDB header:transcription Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of ww domain in transcription elongation2 regulator 1 19 c2h47F_ 13.6 19 PDB header:oxidoreductase/electron transport Chain: F: PDB Molecule:aromatic amine dehydrogenase; PDBTitle: crystal structure of an electron transfer complex between2 aromatic amine dephydrogenase and azurin from alcaligenes3 faecalis (form 1) 20 d1ll7a2 13.4 50 Fold:FKBP-like Superfamily:Chitinase insertion domain Family:Chitinase insertion domain 21 c1gq1B_ not modelled 13.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome cd1 nitrite reductase; PDBTitle: cytochrome cd1 nitrite reductase, y25s mutant, oxidised2 form 22 d1ln1a_ not modelled 12.3 19 Fold:TBP-like Superfamily:Bet v1-like Family:STAR domain 23 d2rm0w1 not modelled 12.3 33 Fold:WW domain-like Superfamily:WW domain Family:WW domain 24 c1f3mB_ not modelled 11.5 30 PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: crystal structure of human serine/threonine kinase pak1 25 d1w9pa2 not modelled 11.4 42 Fold:FKBP-like Superfamily:Chitinase insertion domain Family:Chitinase insertion domain 26 c2diiA_ not modelled 11.0 7 PDB header:transcription Chain: A: PDB Molecule:tfiih basal transcription factor complex p62 PDBTitle: solution structure of the bsd domain of human tfiih basal2 transcription factor complex p62 subunit 27 c1v1hB_ not modelled 10.6 25 PDB header:adenovirus Chain: B: PDB Molecule:fibritin, fiber protein; PDBTitle: adenovirus fibre shaft sequence n-terminally fused to the2 bacteriophage t4 fibritin foldon trimerisation motif with3 a short linker 28 d2diia1 not modelled 10.6 7 Fold:BSD domain-like Superfamily:BSD domain-like Family:BSD domain 29 c3o0rC_ not modelled 10.5 16 PDB header:immune system/oxidoreductase Chain: C: PDB Molecule:nitric oxide reductase subunit c; PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment 30 d1jofa_ not modelled 10.3 16 Fold:7-bladed beta-propeller Superfamily:3-carboxy-cis,cis-mucoante lactonizing enzyme Family:3-carboxy-cis,cis-mucoante lactonizing enzyme 31 d2dk1a1 not modelled 9.9 26 Fold:WW domain-like Superfamily:WW domain Family:WW domain 32 c1ox3A_ not modelled 9.9 25 PDB header:chaperone Chain: A: PDB Molecule:fibritin; PDBTitle: crystal structure of mini-fibritin 33 d1q67a_ not modelled 9.6 12 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Dcp1 34 c1x8yA_ not modelled 9.2 12 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 35 d1pcna1 not modelled 9.0 47 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Colipase-like Family:Colipase-like 36 d2e45a1 not modelled 8.7 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 37 c1avyA_ not modelled 8.7 25 PDB header:coiled coil Chain: A: PDB Molecule:fibritin; PDBTitle: fibritin deletion mutant m (bacteriophage t4) 38 d2paja1 not modelled 8.7 12 Fold:Composite domain of metallo-dependent hydrolases Superfamily:Composite domain of metallo-dependent hydrolases Family:SAH/MTA deaminase-like 39 c2qkmG_ not modelled 8.6 35 PDB header:hydrolase Chain: G: PDB Molecule:spbc3b9.21 protein; PDBTitle: the crystal structure of fission yeast mrna decapping enzyme dcp1-dcp22 complex 40 c2dk1A_ not modelled 8.1 26 PDB header:gene regulation Chain: A: PDB Molecule:ww domain-binding protein 4; PDBTitle: solution structure of ww domain in ww domain binding2 protein 4 (wbp-4) 41 c1gk4A_ not modelled 8.1 10 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 42 c1ymzA_ not modelled 7.8 27 PDB header:unknown function Chain: A: PDB Molecule:cc45; PDBTitle: cc45, an artificial ww domain designed using statistical2 coupling analysis 43 c2jz8A_ not modelled 7.8 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bh09830; PDBTitle: solution nmr structure of bh09830 from bartonella henselae2 modeled with one zn+2 bound. northeast structural genomics3 consortium target bnr55 44 d2hqxa1 not modelled 7.7 20 Fold:SH3-like barrel Superfamily:Tudor/PWWP/MBT Family:Tudor domain 45 c2hqxB_ not modelled 7.7 20 PDB header:transcription Chain: B: PDB Molecule:p100 co-activator tudor domain; PDBTitle: crystal structure of human p100 tudor domain conserved2 region 46 d1pina1 not modelled 7.6 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 47 c2b9nZ_ not modelled 7.2 17 PDB header:ribosome Chain: Z: PDB Molecule:50s ribosomal protein ctc; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf2,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400. 48 c1nwdC_ not modelled 7.0 7 PDB header:binding protein/hydrolase Chain: C: PDB Molecule:glutamate decarboxylase; PDBTitle: solution structure of ca2+/calmodulin bound to the c-2 terminal domain of petunia glutamate decarboxylase 49 c1nwdB_ not modelled 7.0 7 PDB header:binding protein/hydrolase Chain: B: PDB Molecule:glutamate decarboxylase; PDBTitle: solution structure of ca2+/calmodulin bound to the c-2 terminal domain of petunia glutamate decarboxylase 50 c1q67B_ not modelled 6.8 12 PDB header:transcription Chain: B: PDB Molecule:decapping protein involved in mrna degradation- PDBTitle: crystal structure of dcp1p 51 c3movB_ not modelled 6.7 13 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of human lamin-b1 coil 2 segment 52 c2v43A_ not modelled 6.4 24 PDB header:regulator Chain: A: PDB Molecule:sigma-e factor regulatory protein rseb; PDBTitle: crystal structure of rseb: a sensor for periplasmic stress2 response in e. coli 53 c2lawA_ not modelled 6.4 27 PDB header:signaling protein/transcription Chain: A: PDB Molecule:yorkie homolog; PDBTitle: structure of the second ww domain from human yap in complex with a2 human smad1 derived peptide 54 d1f8ab1 not modelled 6.4 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 55 d1o6wa2 not modelled 6.4 27 Fold:WW domain-like Superfamily:WW domain Family:WW domain 56 c1o6wA_ not modelled 6.3 35 PDB header:nuclear protein Chain: A: PDB Molecule:pre-mrna processing protein prp40; PDBTitle: solution structure of the prp40 ww domain pair of the yeast2 splicing factor prp40 57 c2ysiA_ not modelled 6.3 30 PDB header:protein binding Chain: A: PDB Molecule:transcription elongation regulator 1; PDBTitle: solution structure of the first ww domain from the mouse2 transcription elongation regulator 1, transcription factor3 ca150 58 c3gf8A_ not modelled 6.2 19 PDB header:carbohydrate binding protein Chain: A: PDB Molecule:putative polysaccharide binding proteins (duf1812); PDBTitle: crystal structure of putative polysaccharide binding proteins2 (duf1812) (np_809975.1) from bacteroides thetaiotaomicron vpi-5482 at3 2.20 a resolution 59 c1yiuA_ not modelled 6.2 23 PDB header:ligase Chain: A: PDB Molecule:itchy e3 ubiquitin protein ligase; PDBTitle: itch e3 ubiquitin ligase ww3 domain 60 d2madh_ not modelled 5.8 10 Fold:7-bladed beta-propeller Superfamily:YVTN repeat-like/Quinoprotein amine dehydrogenase Family:Methylamine dehydrogenase, H-chain 61 d1eysh1 not modelled 5.7 27 Fold:PRC-barrel domain Superfamily:PRC-barrel domain Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain 62 c2i5nH_ not modelled 5.5 23 PDB header:photosynthesis Chain: H: PDB Molecule:reaction center protein h chain; PDBTitle: 1.96 a x-ray structure of photosynthetic reaction center from2 rhodopseudomonas viridis:crystals grown by microfluidic technique 63 c2kykA_ not modelled 5.4 27 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase itchy homolog; PDBTitle: the sandwich region between two lmp2a py motif regulates the2 interaction between aip4ww2domain and py motif 64 c1eysH_ not modelled 5.4 27 PDB header:electron transport Chain: H: PDB Molecule:photosynthetic reaction center; PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum 65 c2djyA_ not modelled 5.4 14 PDB header:ligase/signaling protein Chain: A: PDB Molecule:smad ubiquitination regulatory factor 2; PDBTitle: solution structure of smurf2 ww3 domain-smad7 py peptide2 complex 66 c2l5fA_ not modelled 5.2 33 PDB header:protein binding Chain: A: PDB Molecule:pre-mrna-processing factor 40 homolog a; PDBTitle: solution structure of the tandem ww domains from hypa/fbp11 67 d1d7qa_ not modelled 5.1 22 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 68 d2oa5a1 not modelled 5.0 21 Fold:BLRF2-like Superfamily:BLRF2-like Family:BLRF2-like 69 d1zr7a1 not modelled 5.0 38 Fold:WW domain-like Superfamily:WW domain Family:WW domain 70 c3ok8A_ not modelled 5.0 0 PDB header:protein binding Chain: A: PDB Molecule:brain-specific angiogenesis inhibitor 1-associated protein PDBTitle: i-bar of pinkbar 71 d1ywia1 not modelled 5.0 35 Fold:WW domain-like Superfamily:WW domain Family:WW domain