Job Description P06722 Confidence 21.64% Date Thu Jan 5 10:59:25 GMT 2012 Rank 12 Aligned Residues 42 % Identity 19% Template d2p7vb1 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		P	P	E	T	E	E	Q	L	L	A	Q	.	.	A	Q	Q	L	S	G	Y	T	L	G	E	L	A	A	L	V	G	L	V	T	P	E	N	L	K	R	D	K	G	W	I	G	V	L	L	E	I	W	L
Query Conservation													.	.
Alig confidence													.	.																			.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		T	A	R	E	A	K	V	L	R	M	R	F	G	I	D	M	N	T	D	Y	T	L	E	E	V	G	K	Q	F	D	V	.	.	.	.	.	.	.	.	T	R	E	R	I	R	Q	I	E	A	K	A	L
Template Known Secondary structure													T	T	T	T	S	S	S												T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.									.	.	.	.	.	.	.	590	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions