Return to main results Retrieve Phyre Job Id

Job DescriptionP06722
Confidence5.78%DateThu Jan 5 10:59:25 GMT 2012
Rank34Aligned Residues48
% Identity23%Templated1d5va_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Forkhead DNA-binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20..... ....30.........40.........50....
Predicted Secondary structure 







...















Query SS confidence 


















. . .




























Query Sequence  LLSPPETEEQLLAQAQQLS. . . GYTLGELAALVGLVTPENLKRDKGWIGVL
Query Conservation     
  
  

  
     ...


  

               

  
 
Alig confidence 


















...




























Template Conservation 
 

  


 

  

  

   


 


  
   


 
    





Template Sequence  LVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSI
Template Known Secondary structure 



SS
T
SSSSB

T

TT
Template Predicted Secondary structure 























Template SS confidence 


















































   2.......10.........20.........30.........40.........50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions