Job Description P06722 Confidence 6.73% Date Thu Jan 5 10:59:25 GMT 2012 Rank 31 Aligned Residues 39 % Identity 28% Template c2k27A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:paired box protein pax-8; PDBTitle: solution structure of human pax8 paired box domain Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	L	S	P	P	E	T	E	E	Q	L	L	A	Q	A	Q	Q	L	S	G	Y	T	L	G	E	L	A	A	L	V	G	L	V	T	P	E	N	L	K	R	D	K	G	W	I	G	V	L	L
Query Conservation
Alig confidence					.	.															.	.														.	.	.	.	.	.	.	.
Template Conservation					.	.															.	.														.	.	.	.	.	.	.	.
Template Sequence		R	P	L	.	.	P	E	V	V	R	Q	R	I	V	D	L	A	H	Q	.	.	G	V	R	P	C	D	I	S	R	Q	L	R	V	.	.	.	.	.	.	.	.	S	H	G	C	V	S	K	I	L
Template Known Secondary structure			S	S	.	.															.	.	T											T		.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure					.	.															.	.														.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions