Return to main results Retrieve Phyre Job Id

Job DescriptionP06722
Confidence23.65%DateThu Jan 5 10:59:25 GMT 2012
Rank9Aligned Residues14
% Identity50%Templatec1q0wA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:vacuolar protein sorting-associated protein PDBTitle: solution structure of vps27 amino-terminal uim-ubiquitin2 complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20....
Predicted Secondary structure 


Query SS confidence 













Query Sequence  PETEEQLLAQAQQL
Query Conservation    
  

  
    
Alig confidence 













Template Conservation 













Template Sequence  PEDEEELIRKAIEL
Template Known Secondary structure 

Template Predicted Secondary structure 


Template SS confidence 













   256...260.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions