Job Description P06722 Confidence 4.51% Date Thu Jan 5 10:59:25 GMT 2012 Rank 40 Aligned Residues 42 % Identity 21% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		P	P	E	T	E	E	Q	L	L	A	Q	.	.	A	Q	Q	L	S	G	Y	T	L	G	E	L	A	A	L	V	G	L	V	T	P	E	N	L	K	R	D	K	G	W	I	G	V	L	L	E	I	W	L
Query Conservation													.	.
Alig confidence													.	.																			.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		S	E	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	.	.	.	.	.	.	.	.	T	R	E	R	I	R	Q	I	E	N	K	A	L
Template Known Secondary structure			T	T	T	T					T	T	S	S	T	T	S	S										T	T	S		S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.									.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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