Return to main results Retrieve Phyre Job Id

Job DescriptionP76513
Confidence12.05%DateThu Jan 5 12:23:53 GMT 2012
Rank9Aligned Residues31
% Identity19%Templatec3pq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:poly(a) rna polymerase; PDBTitle: crystal structure of human mitochondrial poly(a) polymerase (papd1)
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270..
Predicted Secondary structure 






Query SS confidence 































Query Sequence  LEAVQEDMANEFRDLLVEKFKDSKVETFIGTF
Query Conservation   
   
    

 
 
            



Alig confidence 



























.


Template Conservation 
   
  

  

  
   

   
 

.


Template Sequence  NTKLRYLTCSLIEDXAAAYFPDCIVRPF. GSS
Template Known Secondary structure  TTTSTT
.GGG
Template Predicted Secondary structure 



.


Template SS confidence 































   203......210.........220.........230 ...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions