Return to main results Retrieve Phyre Job Id

Job DescriptionP76513
Confidence4.46%DateThu Jan 5 12:23:53 GMT 2012
Rank51Aligned Residues42
% Identity12%Templatec2ebyA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; PDBTitle: crystal structure of a hypothetical protein from e. coli
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160......
Predicted Secondary structure 













Query SS confidence 









































Query Sequence  VNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIR
Query Conservation    
  


 


 



    
         



 

 


Alig confidence 









































Template Conservation 
   



 


   


   

  
 
   

   
 


 
Template Sequence  LEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAK
Template Known Secondary structure  TTTTT

TS
TTSS


Template Predicted Secondary structure 











Template SS confidence 









































   27..30.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions