Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9X4
Confidence97.20%DateThu Jan 5 11:11:37 GMT 2012
Rank87Aligned Residues251
% Identity15%Templatec3r8eA_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical sugar kinase; PDBTitle: crystal structure of a hypothetical sugar kinase (chu_1875) from2 cytophaga hutchinsonii atcc 33406 at 1.65 a resolution
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQ
Query Conservation 



 

    
           

 
               

  
                   
             
Alig confidence 


















.....................................























Template Conservation 



 


     
 
  
..................................... 
                      
Template Sequence  LGIDVGGTSVKFGLVTPEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EIQNATRFXTADWVNGIGFVESXK
Template Known Secondary structure 

SS
TT
.....................................
TTT
Template Predicted Secondary structure 






.....................................





Template SS confidence 















































































   3......10.........20. ........30.........40.....
 
   93......100.... .....110.........120.........130.........140.........150 ........
Predicted Secondary structure 


............














..





Query SS confidence 











. . . . . . . . . . . .













































. .







Query Sequence  HFIKQVHSNSFM. . . . . . . . . . . . RPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIG. . AGLPVSEA
Query Conservation              ............     



 
          
              
     
   ..        
Alig confidence 











............













































..







Template Conservation    
            
 

  
      
                   
       

 
 

    
 

   
     
Template Sequence  LEIGNFLKQYPIVKGVGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENKRX
Template Known Secondary structure 
TT

SS
TTS

BTTB



S


TTSSTTTT
Template Predicted Secondary structure 




































Template SS confidence 















































































   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   159160.........170.........180.........190 .........200.........210... .....
Predicted Secondary structure 













...................




.
Query SS confidence 































. . . . . . . . . . . . . . . . . . .






















.




Query Sequence  TGSMVVDIGGGTTEVAVISLNGVVYSSSVRIG. . . . . . . . . . . . . . . . . . . GDRFDEAIINYVRRNYGSLIGEA. TAERI
Query Conservation     



 
  

 
                
...................
  

  
               .  
  
Alig confidence 










.



















...................






















.




Template Conservation       
    
.

 
         
    


 

                                            
Template Sequence  QTFILLALGTG. VGSGVXXNGKLFIGGRGNGTEVGHXLTTRGKSLENQVGINHLIAYTHEQLALDVAKKSSLHTIAELSP
Template Known Secondary structure  SSSSS.TT


TTS



GGG
B
TTSSBSS
TT


SGGG
SS

Template Predicted Secondary structure 



.








































Template SS confidence 















































































   126...130...... ...140.........150.........160.........170.........180.........190.........200....
 
   219220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGA
Query Conservation 
                               
               
   
   
               


 

 
Alig confidence 










........................

























........










Template Conservation    
   
  

........................  
  

      

  
        ........
  


 
 
 
Template Sequence  KVIADHAAQGD. . . . . . . . . . . . . . . . . . . . . . . . ALALAVWADIGTIIGESLVNIVRVXD. . . . . . . . LNNILLGGGIS
Template Known Secondary structure  TT
........................
........

SGGG
Template Predicted Secondary structure 


........................
........



Template SS confidence 















































































   205....210..... ....220.........230.........240. ........250..
 
   299300 .........310. ........320.........330...
Predicted Secondary structure 

...........








Query SS confidence 

.










. . . . . . . . . .





















Query Sequence  LL. RNLDRLLMEET. . . . . . . . . . GIPVVVAEDPLTCVARGGGKAL
Query Conservation    .
 
   
    ..........   
     
  


 



 
Alig confidence 

.










..........





















Template Conservation           
                 
            


 

Template Sequence  GAFDYFVPNLKKAXLEHLPTYYTDDXYIGKATLENDAGLLGAAGLI
Template Known Secondary structure  GGS
TT

SSGGG
Template Predicted Secondary structure 

















Template SS confidence 













































   253......260.........270.........280.........290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions