Job Description P0A9X4 Confidence 99.92% Date Thu Jan 5 11:11:37 GMT 2012 Rank 23 Aligned Residues 270 % Identity 19% Template c3js6A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:uncharacterized parm protein; PDBTitle: crystal structure of apo psk41 parm protein Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	I	D	L	G	T	A	N	T	L	I	Y	V	K	G	Q	G	I	V	L	N	E	P	S	V	V	A	I	R	Q	D	R	A	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	S	V	A	A	V	G	H	D	A	K	Q	M	L	G	R	T	P	G	N	I	A	A	I
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation																.	.																																																										.	.	.	.	.
Template Sequence		X	A	L	D	F	G	N	G	F	V	K	G	K	I	.	.	N	D	E	K	F	V	I	P	S	R	I	G	R	K	T	N	E	N	N	Q	L	K	G	F	V	D	N	K	L	D	V	S	E	F	I	I	N	G	N	N	D	E	V	L	L	F	G	N	D	L	D	K	T	T	N	T	G	.	.	.	.	.	K	D
Template Known Secondary structure								S	S							.	.	T	T							S							S	S			S	S	T	T	T	S					S							T	T		T	T						S	T	T						S			.	.	.	.	.
Template Predicted Secondary structure																.	.																																																										.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	M	K	D	G	V	I	A	D	F	F	V	T	E	K	M	L	Q	H	F	I	K	Q	V	H	S	N	S	F	M	R	P	S	P	R	V	L	V	C	V	P	V	G	A	T	Q	V	E	R	R	A	I	R	E	S	A	Q	G	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	V	F	L
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	S	T	N	D	R	Y	D	I	K	S	F	K	D	L	V	E	C	S	I	G	L	L	A	R	E	V	P	E	E	V	V	N	V	V	I	A	T	G	X	P	S	N	E	I	G	T	D	K	Q	A	K	F	E	K	L	L	N	K	S	R	L	I	E	I	D	G	I	A	K	T	I	N	V	K	G	V	K	I
Template Known Secondary structure					S	T	T	G	G	G	S																T	T	S		S	S												G	G	G	T	T	S											S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																		.	.	.	.	.	.																																		.	.
Query SS confidence																		.	.	.	.	.	.																																		.	.
Query Sequence		I	E	E	P	M	A	A	A	I	G	A	G	L	P	V	S	.	.	.	.	.	.	E	A	T	G	S	M	V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	N	G	V	V	Y	S	S	S	V	R	I	.	.	G	G	D	R	F	D	E	A	I	I	N	Y	V	R	R	N	Y	G	S	L	I	G	E
Query Conservation																		.	.	.	.	.	.																																		.	.
Alig confidence																		.	.	.	.	.	.																																		.	.																					.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	A	Q	P	X	G	T	L	L	D	L	N	X	E	N	G	K	V	F	K	A	F	T	E	G	K	Y	S	V	L	D	F	G	S	G	T	T	I	I	D	T	Y	Q	N	X	K	R	V	E	E	E	S	F	V	I	N	K	G	T	I	D	F	Y	K	R	I	A	S	H	V	S	T	P	R	M	I	E	.	.	.
Template Known Secondary structure												T	T			T	T								T										S	S									T	T				G	G	G					S														T								.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	A	E	R	I	K	H	E	I	G	S	A	Y	P	G	D	E	V	R	E	I	E	V	R	G	R	N	L	A	E	G	V	P	R	G	F	T	L	N	S	N	E	I	L	E	A	L	Q	E	P	L	T	G	I	V	S	A	V	M	V	A	L	E	Q	C	P	P	E	L	A	S	D	I	S	E	R	G	M	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	L	E	F	K	D	E	F	Y	K	E	Q	D	S	L	I	E	E	V	X	S	N	F	E	I	T	V	G	N	I	N	S	.	.	.	I	D	R	I	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																											T			T	T	S	.	.	.		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
																																									245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	G	G	A	L	L	R	N	L	D	R	L	L	M	E	E	T	G	I	P	V	V	V	A	E	D	P	L	T	C	V	A	R	G	G	G	K	A	L	E	M	I
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		V	T	G	G	G	A	N	I	.	.	H	F	D	S	L	S	H	Y	Y	S	D	V	F	E	K	A	D	D	S	Q	F	S	N	V	R	G	Y	E	K	L	G	E	L	L
Template Known Secondary structure				S	T	T				.	.									S	S	S						S	S	G	G	G
Template Predicted Secondary structure										.	.
Template SS confidence
		296	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions