Job Description P0A9X4 Confidence 100.00% Date Thu Jan 5 11:11:37 GMT 2012 Rank 6 Aligned Residues 321 % Identity 23% Template c3iucC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		F	S	N	D	L	S	I	D	L	G	T	A	N	T	L	I	Y	V	K	G	Q	G	I	V	L	N	E	.	.	.	.	.	.	.	.	.	P	S	V	V	A	I	R	Q	D	R	A	G	S	P	K	S	V	A	A	V	G	H	D	A	K	Q	M	L	G	R	T	P	G	N	I	A	A	I	R	P	M	K	D	G
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		V	G	T	V	V	G	I	D	L	G	T	T	Y	S	C	V	G	V	F	K	N	G	R	V	E	I	I	A	N	D	Q	G	N	R	I	T	P	S	Y	V	A	F	T	P	E	G	E	.	.	.	.	.	.	R	L	I	G	D	A	A	K	N	Q	L	T	S	N	P	E	N	T	V	F	D	A	K	R	L	I	G
Template Known Secondary structure		B										S	S									T	T								T	T	S		S	S									T	T	S		.	.	.	.	.	.				T					T	T	T	T	T		S	T	T					G	G	G	T	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.							.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		80	.	.																																						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	F	V	T	E	K	M	L	Q	H	F	I	K	Q	V	H	S	N	S	F	M	R	P	S	P	R	V	L	V	C	V	P	V	G	A	T	Q	V	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	T	W	N	D	P	S	V	Q	Q	D	I	K	F	L	P	F	K	V	V	E	K	K	T	K	P	Y	I	Q	V	D	I	G	G	G	Q	T	K	T	F	A	P	E	E	I	S	A	M	V	L	T	K	M	K	E	T	A	E	A	Y	L	G	K	K	V	T	H	A	V	V	T	V	P	A	Y	F	N	D	A	Q
Template Known Secondary structure				T	T									T	T		S	S						T	T									S	T	T																											T	S	B										T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		R	R	A	I	R	E	S	A	Q	G	A	G	A	R	E	V	F	L	I	E	E	P	M	A	A	A	I	G	A	G	L	P	V	S	E	A	T	G	S	M	V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	N	G	.	.	.	.	.	V	V	Y	S	S	S	V	R	I	G	G	D	R	F	D	E	A
Query Conservation																																																												.	.	.	.	.
Alig confidence																														.																														.	.	.	.	.
Template Conservation																														.
Template Sequence		R	Q	A	T	K	D	A	G	T	I	A	G	L	N	V	M	R	I	I	N	E	P	T	A	A	A	I	A	.	Y	G	L	D	K	G	E	K	N	I	L	V	F	D	L	G	G	G	T	F	D	V	S	L	L	T	I	D	N	G	V	F	E	V	V	A	T	N	G	D	T	H	L	G	G	E	D	F	D	Q	R
Template Known Secondary structure													T																	.	T	T	T	T													S	S											T	T											T	T		S
Template Predicted Secondary structure																														.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure												.	.	.	.	.	.																						.
Query SS confidence												.	.	.	.	.	.																						.
Query Sequence		I	I	N	Y	V	R	R	N	Y	G	.	.	.	.	.	.	S	L	I	G	E	A	T	A	E	R	I	K	H	E	I	G	S	A	Y	P	G	.	D	E	V	R	E	I	E	V	R	G	R	N	L	A	E	G	V	P	R	G	F	T	L	N	S	N	E	I	L	E	A	L	Q	E	P	L	T	G	I	V	S	A
Query Conservation												.	.	.	.	.	.																						.
Alig confidence												.	.	.	.	.	.																						.
Template Conservation
Template Sequence		V	M	E	H	F	I	K	L	Y	K	K	K	T	G	K	D	V	R	K	D	N	R	A	V	Q	K	L	R	R	E	V	E	K	A	K	R	A	L	S	S	Q	H	Q	A	R	I	E	I	E	S	F	Y	E	G	E	D	F	S	E	T	L	T	R	A	K	F	E	E	L	N	M	D	L	F	R	S	T	M	K	P
Template Known Secondary structure															S				T	T																				T	T	S	S											T	T																T						T	T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		V	M	V	A	L	E	Q	C	P	P	E	L	A	S	D	I	S	E	R	G	M	V	L	T	G	G	G	A	L	L	R	N	L	D	R	L	L	M	E	E	T	.	G	I	P	V	V	V	A	E	D	P	L	T	C	V	A	R	G	G	G	K	A	L	E	M	I	D	M	H
Query Conservation																																											.
Alig confidence																.	.	.																									.
Template Conservation																.	.	.
Template Sequence		V	Q	K	V	L	E	D	S	D	L	K	K	S	D	.	.	.	I	D	E	I	V	L	V	G	G	S	T	R	I	P	K	I	Q	Q	L	V	K	E	F	F	N	G	K	E	P	S	R	G	I	N	P	D	E	A	V	A	Y	G	A	A	V	Q	A	G	V	L	S	G	D
Template Known Secondary structure									T	T			G	G	G	.	.	.								S	G	G	G	G												T	T	T						S	S		T	T	T															T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		342	.	.	.	.	.	.	.	350	.	.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions