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Job DescriptionP0A9X4
Confidence97.26%DateThu Jan 5 11:11:37 GMT 2012
Rank85Aligned Residues282
% Identity16%Templatec3enoB_
PDB info PDB header:hydrolase/unknown functionChain: B: PDB Molecule:putative o-sialoglycoprotein endopeptidase; PDBTitle: crystal structure of pyrococcus furiosus pcc1 in complex2 with thermoplasma acidophilum kae1
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  NDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFV. . . .
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Template Sequence  IVLGLEGTAHTISCGIIDESRILA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MESSMYRPKTGGIRPLDAAVHH
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SSS
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   2.......10.........20..... ....30.........40.......
 
   87..90.........100.........110.... .....120.........130.........140.........150.........160....
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Query Sequence  TEKMLQHFIKQVHSNSFMRPSPRVLVCV. . PVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVV
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Template Sequence  SEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRRVTGAIDPVML
Template Known Secondary structure  T

GGG


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   48.50.........60.........70.........80.........90.........100.........110.........120.......
 
   165....170.........180 .........190.........200.........210.........220.........230.........240..
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Query Sequence  DIGGGTTEVAVISLNG. . VVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLA
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Template Sequence  YVSGGNTQVIAHVNGRYRVLGETLDIGIGNMIDK. . . . . FAREAGIPFPG. . . GPEIEKLAMKGTKLLDLPYSVKGMDTA
Template Known Secondary structure  SSS

SSBBSS

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   128.130.........140.........150.........160. ........170.. .......180.........190.........
 
   243......250.........260.........270.........280.........290.........300.........310. ........
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Query Sequence  EGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEET. . . GIPVVVAE
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Template Sequence  FSGILTAALQYLKTGQAIEDISYSIQETAFAMLVEVLERALYVSGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTD
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T




SSSGGG
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   200.........210.........220.........230.........240.........250.........260.........270.........
 
   320. ........330....
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Query Sequence  DP. . . LTCVARGGGKALE
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Template Sequence  REYCMDNGIMIAQAALLM
Template Known Secondary structure  TTTTS

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   280.........290.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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