Job Description P0A9X4 Confidence 100.00% Date Thu Jan 5 11:11:37 GMT 2012 Rank 11 Aligned Residues 320 % Identity 18% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		F	S	N	D	L	S	I	D	L	G	T	A	N	T	L	I	Y	V	K	G	Q	G	I	V	L	.	N	E	P	S	V	V	A	I	R	Q	D	R	A	G	S	P	K	S	V	A	A	V	G	H	D	A	K	Q	M	L	G	R	T	P	G	N	I	A	A	I	R	P	M	K	D	G	V	I	A	D	F	F	V	T
Query Conservation																											.
Alig confidence																											.												.	.	.	.	.													.	.	.
Template Conservation																																							.	.	.	.	.													.	.	.
Template Sequence		F	N	V	P	I	I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	F	P	T	V	I	A	T	R	T	E	.	.	.	.	.	D	L	D	F	F	I	G	N	D	A	L	K	.	.	.	K	A	S	A	G	Y	S	L	D	Y	P	I	R	H	G	Q	I	E	N	W	D	H	M
Template Known Secondary structure												S	S							T	T	S	S	S		S													.	.	.	.	.	S	S					T						.	.	.	T										S			T	T
Template Predicted Secondary structure																																							.	.	.	.	.													.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																											.																											.	.	.
Query SS confidence																																											.																											.	.	.
Query Sequence		E	K	M	L	Q	H	F	I	K	Q	V	H	S	N	S	F	M	R	P	S	P	R	V	L	V	C	V	P	V	G	A	T	Q	V	E	R	R	A	I	R	E	.	S	A	Q	G	A	G	A	R	E	V	F	L	I	E	E	P	M	A	A	A	I	G	A	G	L	P	.	.	.	V	S	E	A	T	G	S	M	V
Query Conservation																																											.																											.	.	.
Alig confidence																.	.																										.																											.	.	.
Template Conservation																.	.
Template Sequence		E	R	F	W	Q	Q	S	L	F	K	Y	L	R	C	.	.	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	N	R	E	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S	K	V	T	D	R	S	L	T	G	T	V
Template Known Secondary structure											T	T	S			.	.		G	G	G									T	T																T	T			S														G	G	G	G	S	T	T	T		S
Template Predicted Secondary structure																.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	N	G	V	V	.	.	Y	S	S	S	V	R	I	G	G	D	R	F	D	E	A	I	I	N	Y	V	R	R	N	Y	G	S	L	I	G	E	A	T	A	E	R	I	K	H	E	I	G	S	A	Y	P	G	D	E	V	R	E	I	E	V	R	G	R	N	L
Query Conservation																					.	.
Alig confidence																					.	.																			.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		V	D	S	G	D	G	V	T	H	I	I	P	V	A	E	G	Y	V	I	G	S	S	I	K	T	M	P	L	A	G	R	D	V	T	Y	F	V	Q	S	.	.	.	.	.	.	.	.	L	L	R	L	K	T	A	E	R	I	K	E	E	C	C	Y	V	C	P	D	I	V	K	E	F	S	R	F	D	R	L	K	Y
Template Known Secondary structure					S	S	S									T	T				G	G	G					S													.	.	.	.	.	.	.	.	T	T																	S									T	T				B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		242	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure							.	.	.	.																																																																			.	.	.	.	.
Query SS confidence							.	.	.	.																																																																			.	.	.	.	.
Query Sequence		A	E	G	V	P	.	.	.	.	R	G	F	T	L	N	S	N	E	I	L	E	A	L	Q	E	P	L	T	G	I	V	S	A	V	M	V	A	L	E	Q	C	P	P	E	L	A	S	D	I	S	E	R	G	M	V	L	T	G	G	G	A	L	L	R	N	L	D	R	L	L	M	E	E	T	G	.	.	.	.	.
Query Conservation							.	.	.	.																																																																			.	.	.	.	.
Alig confidence							.	.	.	.																																										.																									.	.	.	.	.
Template Conservation																																																				.
Template Sequence		A	S	I	D	V	G	F	E	R	F	L	A	P	E	I	F	F	N	P	E	I	A	S	S	D	F	L	T	P	L	P	E	L	V	D	N	V	V	Q	S	S	P	I	D	V	R	K	G	L	Y	.	K	N	I	V	L	S	G	G	S	T	L	F	K	N	F	G	N	R	L	Q	R	D	L	K	R	I	V	D	E
Template Known Secondary structure					B			T					S	G	G	G	G	T		G	G	G	T		S	S			S												T	S										.							S	G	G	G		S	T	T	T	T												T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
						313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	I	P	V	V	V	A	E	D	P	L	T	C	V	A	R	G	G	G	K	A	L	E	M	I	D	M	H	G	G	D	L	F	S	E	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		R	G	V	D	V	N	V	I	S	H	K	R	Q	R	N	A	V	W	F	G	G	S	L	L	A	Q	T	P	E	F	G	S	Y	C	H	T	K	A	D
Template Known Secondary structure												T	T		T	T												S	T	T					S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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