Job Description P0A9X4 Confidence 100.00% Date Thu Jan 5 11:11:37 GMT 2012 Rank 2 Aligned Residues 328 % Identity 26% Template c2v7yA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:chaperone protein dnak; PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Query Sequence		F	S	N	D	L	S	I	D	L	G	T	A	N	T	L	I	Y	V	K	G	Q	G	I	V	L	N	E	.	.	.	.	.	.	.	.	.	P	S	V	V	A	I	R	Q	D	R	A	G	S	P	K	S	V	A	A	V	G	H	D	A	K	Q	M	L	G	R	T	P	G	N	I	A	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		M	S	K	I	I	G	I	D	L	G	T	T	N	S	C	V	A	V	L	E	G	G	E	V	K	V	I	P	N	P	E	G	N	R	T	T	P	S	V	V	A	F	K	N	G	.	.	.	.	.	.	.	E	R	L	V	G	E	V	A	K	R	Q	A	I	T	N	P	N	T	I	I	S	I	K	R	H	M	G	T
Template Known Secondary structure												S	S									T	T								T	T	S		S	S								S	S	S	.	.	.	.	.	.	.	S				S					T	T	T	T	T		S	S					G	G	G	T	T	T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.								.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
			72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	I	R	P	M	K	D	G	V	I	A	D	F	F	V	T	E	K	M	L	Q	H	F	I	K	Q	V	H	S	N	S	F	M	R	P	S	P	R	V	L	V	C	V	P	V	G	A	T	Q	V	E	R	R	A	I	R	E	S	A	Q	G	A	G	A	R	E	V	F	L	I	E	E	P	M	A	A	A	I	G
Query Conservation		.
Alig confidence		.																																.
Template Conservation																																		.
Template Sequence		D	Y	K	V	E	I	E	G	K	Q	Y	T	P	Q	E	I	S	A	I	I	L	Q	Y	L	K	S	Y	A	E	D	Y	L	.	G	E	P	V	T	R	A	V	I	T	V	P	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I	A	G	L	E	V	E	R	I	I	N	E	P	T	A	A	A	L	A
Template Known Secondary structure								T	T																									.	T	S											T	T																T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		A	G	L	P	V	S	E	A	T	G	S	M	V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	N	G	.	.	.	.	.	V	V	Y	S	S	S	V	R	I	G	G	D	R	F	D	E	A	I	I	N	Y	V	R	R	N	Y	G	.	.	.	.	.	.	S	L	I	G	E	A	T	A	E	R	I	K
Query Conservation																																.	.	.	.	.																												.	.	.	.	.	.
Alig confidence																																.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		Y	G	L	D	K	E	E	D	Q	T	I	L	V	Y	D	L	G	G	G	T	F	D	V	S	I	L	E	L	G	D	G	V	F	E	V	K	A	T	A	G	D	N	H	L	G	G	D	D	F	D	Q	V	I	I	D	Y	L	V	N	Q	F	K	Q	E	H	G	I	D	L	S	K	D	K	M	A	L	Q	R	L	K
Template Known Secondary structure		T	T	G	G	G	S		S										S	S											T	T											T	T		S																					S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.						.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		H	E	I	G	S	A	Y	P	G	D	E	V	R	E	I	.	.	.	.	.	E	V	R	G	R	N	L	A	E	G	V	P	R	G	F	T	L	N	S	N	E	I	L	E	A	L	Q	E	P	L	T	G	I	V	S	A	V	M	V	A	L	E	Q	C	P	P	E	L	A	S	D	I	S	E	R	G	M	V	L	T
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																																			.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		D	A	A	E	K	A	K	K	E	L	S	G	V	T	Q	T	Q	I	S	L	P	F	I	S	A	N	E	N	G	P	L	H	L	E	M	T	L	T	R	A	K	F	E	E	L	S	A	H	L	V	E	R	T	M	G	P	V	R	Q	A	L	Q	D	A	G	L	T	P	A	D	.	.	.	I	D	K	V	I	L	V
Template Known Secondary structure											T	T	T		S													T	T																		T						T	T												T			G	G	G	.	.	.		S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	A	L	L	R	N	L	D	R	L	L	M	E	E	T	G	I	P	V	V	V	A	E	D	P	L	T	C	V	A	R	G	G	G	K	A	L	E	M	I	D	M	H	G	G	D	L	F	S	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	S	T	R	I	P	A	V	Q	E	A	I	K	R	E	L	G	K	E	P	H	K	G	V	N	P	D	E	V	V	A	I	G	A	A	I	Q	G	G	V	I	A	G	E	V	K	D	V	V	L	L	D
Template Known Secondary structure		S	G	G	G	G													S	S			B			S		T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions